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How to use install_extras method in pandera
Best Python code snippet using pandera_python
noxfile.py
Source:noxfile.py 
1# pylint: disable=missing-module-docstring,import-error,protected-access,missing-function-docstring2import datetime3import json4import os5import pathlib6import shutil7import sys8import tempfile9from pathlib import Path10import nox11from nox.command import CommandFailed12from nox.virtualenv import VirtualEnv13# Nox options14# Reuse existing virtualenvs15nox.options.reuse_existing_virtualenvs = True16# Don't fail on missing interpreters17nox.options.error_on_missing_interpreters = False18# Python versions to test against19PYTHON_VERSIONS = ("3", "3.5", "3.6", "3.7", "3.8", "3.9")20# Be verbose when running under a CI context21CI_RUN = (22 os.environ.get("JENKINS_URL") or os.environ.get("CI") or os.environ.get("DRONE") is not None23)24PIP_INSTALL_SILENT = CI_RUN is False25SKIP_REQUIREMENTS_INSTALL = "SKIP_REQUIREMENTS_INSTALL" in os.environ26EXTRA_REQUIREMENTS_INSTALL = os.environ.get("EXTRA_REQUIREMENTS_INSTALL")27COVERAGE_VERSION_REQUIREMENT = "coverage==5.2"28SALT_REQUIREMENT = os.environ.get("SALT_REQUIREMENT") or "salt>=3003rc1"29if SALT_REQUIREMENT == "salt==master":30 SALT_REQUIREMENT = "git+https://github.com/saltstack/salt.git@master"31# Prevent Python from writing bytecode32os.environ["PYTHONDONTWRITEBYTECODE"] = "1"33# Global Path Definitions34REPO_ROOT = pathlib.Path(__file__).resolve().parent35# Change current directory to REPO_ROOT36os.chdir(str(REPO_ROOT))37ARTIFACTS_DIR = REPO_ROOT / "artifacts"38# Make sure the artifacts directory exists39ARTIFACTS_DIR.mkdir(parents=True, exist_ok=True)40RUNTESTS_LOGFILE = ARTIFACTS_DIR / "runtests-{}.log".format(41 datetime.datetime.now().strftime("%Y%m%d%H%M%S.%f")42)43COVERAGE_REPORT_DB = REPO_ROOT / ".coverage"44COVERAGE_REPORT_PROJECT = ARTIFACTS_DIR.relative_to(REPO_ROOT) / "coverage-project.xml"45COVERAGE_REPORT_TESTS = ARTIFACTS_DIR.relative_to(REPO_ROOT) / "coverage-tests.xml"46JUNIT_REPORT = ARTIFACTS_DIR.relative_to(REPO_ROOT) / "junit-report.xml"47def _get_session_python_version_info(session):48 try:49 version_info = session._runner._real_python_version_info50 except AttributeError:51 session_py_version = session.run_always(52 "python",53 "-c" 'import sys; sys.stdout.write("{}.{}.{}".format(*sys.version_info))',54 silent=True,55 log=False,56 )57 version_info = tuple(int(part) for part in session_py_version.split(".") if part.isdigit())58 session._runner._real_python_version_info = version_info59 return version_info60def _get_pydir(session):61 version_info = _get_session_python_version_info(session)62 if version_info < (3, 5):63 session.error("Only Python >= 3.5 is supported")64 return "py{}.{}".format(*version_info)65def _install_requirements(66 session,67 *passed_requirements,68 install_coverage_requirements=True,69 install_test_requirements=True,70 install_source=False,71 install_salt=True,72 install_extras=None,73):74 install_extras = install_extras or []75 if SKIP_REQUIREMENTS_INSTALL is False:76 # Always have the wheel package installed77 session.install("--progress-bar=off", "wheel", silent=PIP_INSTALL_SILENT)78 if install_coverage_requirements:79 session.install(80 "--progress-bar=off", COVERAGE_VERSION_REQUIREMENT, silent=PIP_INSTALL_SILENT81 )82 if install_salt:83 session.install("--progress-bar=off", SALT_REQUIREMENT, silent=PIP_INSTALL_SILENT)84 if install_test_requirements:85 install_extras.append("tests")86 if EXTRA_REQUIREMENTS_INSTALL:87 session.log(88 "Installing the following extra requirements because the "89 "EXTRA_REQUIREMENTS_INSTALL environment variable was set: "90 "EXTRA_REQUIREMENTS_INSTALL='%s'",91 EXTRA_REQUIREMENTS_INSTALL,92 )93 install_command = ["--progress-bar=off"]94 install_command += [req.strip() for req in EXTRA_REQUIREMENTS_INSTALL.split()]95 session.install(*passed_requirements, silent=PIP_INSTALL_SILENT)96 if install_source:97 pkg = "."98 if install_extras:99 pkg += f"[{','.join(install_extras)}]"100 session.install("-e", pkg, silent=PIP_INSTALL_SILENT)101 elif install_extras:102 pkg = f".[{','.join(install_extras)}]"103 session.install(pkg, silent=PIP_INSTALL_SILENT)104@nox.session(python=PYTHON_VERSIONS)105def tests(session):106 _install_requirements(session, install_source=True)107 sitecustomize_dir = session.run("salt-factories", "--coverage", silent=True, log=False)108 python_path_env_var = os.environ.get("PYTHONPATH") or None109 if python_path_env_var is None:110 python_path_env_var = sitecustomize_dir111 else:112 python_path_entries = python_path_env_var.split(os.pathsep)113 if sitecustomize_dir in python_path_entries:114 python_path_entries.remove(sitecustomize_dir)115 python_path_entries.insert(0, sitecustomize_dir)116 python_path_env_var = os.pathsep.join(python_path_entries)117 env = {118 # The updated python path so that sitecustomize is importable119 "PYTHONPATH": python_path_env_var,120 # The full path to the .coverage data file. Makes sure we always write121 # them to the same directory122 "COVERAGE_FILE": str(COVERAGE_REPORT_DB),123 # Instruct sub processes to also run under coverage124 "COVERAGE_PROCESS_START": str(REPO_ROOT / ".coveragerc"),125 }126 session.run("coverage", "erase")127 args = [128 "--rootdir",129 str(REPO_ROOT),130 f"--log-file={RUNTESTS_LOGFILE.relative_to(REPO_ROOT)}",131 "--log-file-level=debug",132 "--show-capture=no",133 f"--junitxml={JUNIT_REPORT}",134 "--showlocals",135 "-ra",136 "-s",137 ]138 if session._runner.global_config.forcecolor:139 args.append("--color=yes")140 if not session.posargs:141 args.append("tests/")142 else:143 for arg in session.posargs:144 if arg.startswith("--color") and args[0].startswith("--color"):145 args.pop(0)146 args.append(arg)147 for arg in session.posargs:148 if arg.startswith("-"):149 continue150 if arg.startswith(f"tests{os.sep}"):151 break152 try:153 pathlib.Path(arg).resolve().relative_to(REPO_ROOT / "tests")154 break155 except ValueError:156 continue157 else:158 args.append("tests/")159 try:160 session.run("coverage", "run", "-m", "pytest", *args, env=env)161 finally:162 # Always combine and generate the XML coverage report163 try:164 session.run("coverage", "combine")165 except CommandFailed:166 # Sometimes some of the coverage files are corrupt which would167 # trigger a CommandFailed exception168 pass169 # Generate report for salt code coverage170 session.run(171 "coverage",172 "xml",173 "-o",174 str(COVERAGE_REPORT_PROJECT),175 "--omit=tests/*",176 "--include=src/saltext/eight_ball/*",177 )178 # Generate report for tests code coverage179 session.run(180 "coverage",181 "xml",182 "-o",183 str(COVERAGE_REPORT_TESTS),184 "--omit=src/saltext/eight_ball/*",185 "--include=tests/*",186 )187 try:188 session.run(189 "coverage", "report", "--show-missing", "--include=src/saltext/eight_ball/*"190 )191 # If you also want to display the code coverage report on the CLI192 # for the tests, comment the call above and uncomment the line below193 # session.run(194 # "coverage", "report", "--show-missing",195 # "--include=src/saltext/eight_ball/*,tests/*"196 # )197 finally:198 # Move the coverage DB to artifacts/coverage in order for it to be archived by CI199 if COVERAGE_REPORT_DB.exists():200 shutil.move(str(COVERAGE_REPORT_DB), str(ARTIFACTS_DIR / COVERAGE_REPORT_DB.name))201class Tee:202 """203 Python class to mimic linux tee behaviour204 """205 def __init__(self, first, second):206 self._first = first207 self._second = second208 def write(self, buf):209 wrote = self._first.write(buf)210 self._first.flush()211 self._second.write(buf)212 self._second.flush()213 return wrote214 def fileno(self):215 return self._first.fileno()216def _lint(session, rcfile, flags, paths, tee_output=True):217 _install_requirements(218 session,219 install_salt=False,220 install_coverage_requirements=False,221 install_test_requirements=False,222 install_extras=["dev", "tests"],223 )224 if tee_output:225 session.run("pylint", "--version")226 pylint_report_path = os.environ.get("PYLINT_REPORT")227 cmd_args = ["pylint", f"--rcfile={rcfile}"] + list(flags) + list(paths)228 src_path = str(REPO_ROOT / "src")229 python_path_env_var = os.environ.get("PYTHONPATH") or None230 if python_path_env_var is None:231 python_path_env_var = src_path232 else:233 python_path_entries = python_path_env_var.split(os.pathsep)234 if src_path in python_path_entries:235 python_path_entries.remove(src_path)236 python_path_entries.insert(0, src_path)237 python_path_env_var = os.pathsep.join(python_path_entries)238 env = {239 # The updated python path so that the project is importable without installing it240 "PYTHONPATH": python_path_env_var,241 "PYTHONUNBUFFERED": "1",242 }243 cmd_kwargs = {"env": env}244 if tee_output:245 stdout = tempfile.TemporaryFile(mode="w+b")246 cmd_kwargs["stdout"] = Tee(stdout, sys.__stdout__)247 try:248 session.run(*cmd_args, **cmd_kwargs)249 finally:250 if tee_output:251 stdout.seek(0)252 contents = stdout.read()253 if contents:254 contents = contents.decode("utf-8")255 sys.stdout.write(contents)256 sys.stdout.flush()257 if pylint_report_path:258 # Write report259 with open(pylint_report_path, "w") as wfh:260 wfh.write(contents)261 session.log("Report file written to %r", pylint_report_path)262 stdout.close()263def _lint_pre_commit(session, rcfile, flags, paths):264 if "VIRTUAL_ENV" not in os.environ:265 session.error(266 "This should be running from within a virtualenv and "267 "'VIRTUAL_ENV' was not found as an environment variable."268 )269 if "pre-commit" not in os.environ["VIRTUAL_ENV"]:270 session.error(271 "This should be running from within a pre-commit virtualenv and "272 "'VIRTUAL_ENV'({}) does not appear to be a pre-commit virtualenv.".format(273 os.environ["VIRTUAL_ENV"]274 )275 )276 # Let's patch nox to make it run inside the pre-commit virtualenv277 session._runner.venv = VirtualEnv(278 os.environ["VIRTUAL_ENV"],279 interpreter=session._runner.func.python,280 reuse_existing=True,281 venv=True,282 )283 _lint(session, rcfile, flags, paths, tee_output=False)284@nox.session(python="3")285def lint(session):286 """287 Run PyLint against the code and the test suite. Set PYLINT_REPORT to a path to capture output.288 """289 session.notify(f"lint-code-{session.python}")290 session.notify(f"lint-tests-{session.python}")291@nox.session(python="3", name="lint-code")292def lint_code(session):293 """294 Run PyLint against the code. Set PYLINT_REPORT to a path to capture output.295 """296 flags = ["--disable=I"]297 if session.posargs:298 paths = session.posargs299 else:300 paths = ["setup.py", "noxfile.py", "src/"]301 _lint(session, ".pylintrc", flags, paths)302@nox.session(python="3", name="lint-tests")303def lint_tests(session):304 """305 Run PyLint against the test suite. Set PYLINT_REPORT to a path to capture output.306 """307 flags = [308 "--disable=I,redefined-outer-name,missing-function-docstring,no-member,missing-module-docstring"309 ]310 if session.posargs:311 paths = session.posargs312 else:313 paths = ["tests/"]314 _lint(session, ".pylintrc", flags, paths)315@nox.session(python=False, name="lint-code-pre-commit")316def lint_code_pre_commit(session):317 """318 Run PyLint against the code. Set PYLINT_REPORT to a path to capture output.319 """320 flags = ["--disable=I"]321 if session.posargs:322 paths = session.posargs323 else:324 paths = ["setup.py", "noxfile.py", "src/"]325 _lint_pre_commit(session, ".pylintrc", flags, paths)326@nox.session(python=False, name="lint-tests-pre-commit")327def lint_tests_pre_commit(session):328 """329 Run PyLint against the code and the test suite. Set PYLINT_REPORT to a path to capture output.330 """331 flags = [332 "--disable=I,redefined-outer-name,missing-function-docstring,no-member,missing-module-docstring",333 ]334 if session.posargs:335 paths = session.posargs336 else:337 paths = ["tests/"]338 _lint_pre_commit(session, ".pylintrc", flags, paths)339@nox.session(python="3")340def docs(session):341 """342 Build Docs343 """344 _install_requirements(345 session,346 install_coverage_requirements=False,347 install_test_requirements=False,348 install_source=True,349 install_extras=["docs"],350 )351 os.chdir("docs/")352 session.run("make", "clean", external=True)353 session.run("make", "linkcheck", "SPHINXOPTS=-W", external=True)354 session.run("make", "coverage", "SPHINXOPTS=-W", external=True)355 docs_coverage_file = os.path.join("_build", "html", "python.txt")356 if os.path.exists(docs_coverage_file):357 with open(docs_coverage_file) as rfh:358 contents = rfh.readlines()[2:]359 if contents:360 session.error("\n" + "".join(contents))361 session.run("make", "html", "SPHINXOPTS=-W", external=True)362 os.chdir(str(REPO_ROOT))363@nox.session(name="docs-html", python="3")364@nox.parametrize("clean", [False, True])365@nox.parametrize("include_api_docs", [False, True])366def docs_html(session, clean, include_api_docs):367 """368 Build Sphinx HTML Documentation369 TODO: Add option for `make linkcheck` and `make coverage`370 calls via Sphinx. Ran into problems with two when371 using Furo theme and latest Sphinx.372 """373 _install_requirements(374 session,375 install_coverage_requirements=False,376 install_test_requirements=False,377 install_source=True,378 install_extras=["docs"],379 )380 if include_api_docs:381 gen_api_docs(session)382 build_dir = Path("docs", "_build", "html")383 sphinxopts = "-Wn"384 if clean:385 sphinxopts += "E"386 args = [sphinxopts, "--keep-going", "docs", str(build_dir)]387 session.run("sphinx-build", *args, external=True)388@nox.session(name="docs-dev", python="3")389@nox.parametrize("clean", [False, True])390def docs_dev(session, clean) -> None:391 """392 Build and serve the Sphinx HTML documentation, with live reloading on file changes, via sphinx-autobuild.393 Note: Only use this in INTERACTIVE DEVELOPMENT MODE. This SHOULD NOT be called394 in CI/CD pipelines, as it will hang.395 """396 _install_requirements(397 session,398 install_coverage_requirements=False,399 install_test_requirements=False,400 install_source=True,401 install_extras=["docs", "docsauto"],402 )403 # Launching LIVE reloading Sphinx session404 build_dir = Path("docs", "_build", "html")405 args = ["--watch", ".", "--open-browser", "docs", str(build_dir)]406 if clean and build_dir.exists():407 shutil.rmtree(build_dir)408 session.run("sphinx-autobuild", *args)409@nox.session(name="docs-crosslink-info", python="3")410def docs_crosslink_info(session):411 """412 Report intersphinx cross links information413 """414 _install_requirements(415 session,416 install_coverage_requirements=False,417 install_test_requirements=False,418 install_source=True,419 install_extras=["docs"],420 )421 os.chdir("docs/")422 intersphinx_mapping = json.loads(423 session.run(424 "python",425 "-c",426 "import json; import conf; print(json.dumps(conf.intersphinx_mapping))",427 silent=True,428 log=False,429 )430 )431 try:432 mapping_entry = intersphinx_mapping[session.posargs[0]]433 except IndexError:434 session.error(435 "You need to pass at least one argument whose value must be one of: {}".format(436 ", ".join(list(intersphinx_mapping))437 )438 )439 except KeyError:440 session.error(441 "Only acceptable values for first argument are: {}".format(442 ", ".join(list(intersphinx_mapping))443 )444 )445 session.run(446 "python", "-m", "sphinx.ext.intersphinx", mapping_entry[0].rstrip("/") + "/objects.inv"447 )448 os.chdir(str(REPO_ROOT))449@nox.session(name="gen-api-docs", python="3")450def gen_api_docs(session):451 """452 Generate API Docs453 """454 _install_requirements(455 session,456 install_coverage_requirements=False,457 install_test_requirements=False,458 install_source=True,459 install_extras=["docs"],460 )461 shutil.rmtree("docs/ref")462 session.run(463 "sphinx-apidoc",464 "--implicit-namespaces",465 "--module-first",466 "-o",467 "docs/ref/",468 "src/saltext",469 "src/saltext/eight_ball/config/schemas",...
setup.py
Source:setup.py
1# /setup.py2#3# Installation and setup script for psqtraviscontainer4#5# See /LICENCE.md for Copyright information6"""Installation and setup script for psqtraviscontainer."""7import platform8from setuptools import find_packages, setup9INSTALL_EXTRAS = []10if platform.system() != "Windows":11 INSTALL_EXTRAS.extend([12 "python-debian"13 ])14setup(name="polysquare-travis-container",15 version="0.0.47",16 description="""Polysquare Travis-CI Container Root""",17 long_description_markdown_filename="README.md",18 long_description_content_type="text/markdown",19 author="Sam Spilsbury",20 author_email="smspillaz@gmail.com",21 classifiers=["Development Status :: 3 - Alpha",22 "Intended Audience :: Developers",23 "Topic :: Software Development :: Build Tools",24 "License :: OSI Approved :: MIT License",25 "Programming Language :: Python :: 3",26 "Programming Language :: Python :: 3.3",27 "Programming Language :: Python :: 3.4"],28 url="http://github.com/polysquare/polysquare-travis-container",29 license="MIT",30 keywords="development travis",31 packages=find_packages(exclude=["test"]),32 install_requires=["clint",33 "parse-shebang>=0.0.3",34 "requests",35 "six",36 "shutilwhich",37 "tempdir"] + INSTALL_EXTRAS,38 extras_require={39 "upload": [40 "setuptools-markdown"41 ]42 },43 entry_points={44 "console_scripts": [45 "psq-travis-container-create=psqtraviscontainer.create:main",46 "psq-travis-container-exec=psqtraviscontainer.use:main",47 "psq-travis-container-get-root=psqtraviscontainer.rootdir:main"48 ]49 },50 test_suite="nose.collector",51 zip_safe=True,...
json_provider.py
Source:json_provider.py
...18 msgs.append(f"Line {lineno}, column {colno}, {msg}")19 raise SyntaxError(f"Filename {filename}:\n" + "\n".join(msgs))20if __name__ == '__main__':21 from prettyprinter import pprint, install_extras22 install_extras()23 pprint(24 parse(r"""25\schema a = [a, b] 26 """)...
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