How to use infer_series_schema method in pandera

Best Python code snippet using pandera_python

test_schema_inference.py

Source: test_schema_inference.py Github

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...97 pd.Series(list("abcdefg"), dtype="category"),98 pd.Series(pd.to_datetime(["20180101", "20180102", "20180103"])),99 ],100)101def test_infer_series_schema(series: pd.Series) -> None:102 """Test series schema is correctly inferred."""103 schema = schema_inference.infer_series_schema(series)104 assert isinstance(schema, pa.SeriesSchema)105 with pytest.warns(106 UserWarning,107 match="^This .+ is an inferred schema that hasn't been modified",108 ):109 schema.validate(series)110 # modifying an inferred schema should set _is_inferred to False111 schema_with_new_checks = schema.set_checks(112 [pa.Check(lambda x: x is not None)]113 )114 assert schema._is_inferred115 assert not schema_with_new_checks._is_inferred...

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schema_inference.py

Source: schema_inference.py Github

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...18 """19 if isinstance(pandas_obj, pd.DataFrame):20 return infer_dataframe_schema(pandas_obj)21 elif isinstance(pandas_obj, pd.Series):22 return infer_series_schema(pandas_obj)23 else:24 raise TypeError(25 "pandas_obj type not recognized. Expected a pandas DataFrame or "26 f"Series, found {type(pandas_obj)}"27 )28def _create_index(index_statistics):29 index = [30 Index(31 properties["dtype"],32 checks=parse_check_statistics(properties["checks"]),33 nullable=properties["nullable"],34 name=properties["name"],35 )36 for properties in index_statistics37 ]38 if len(index) == 1:39 index = index[0] # type: ignore40 else:41 index = MultiIndex(index) # type: ignore42 return index43def infer_dataframe_schema(df: pd.DataFrame) -> DataFrameSchema:44 """Infer a DataFrameSchema from a pandas DataFrame.45 :param df: DataFrame object to infer.46 :returns: DataFrameSchema47 """48 df_statistics = infer_dataframe_statistics(df)49 schema = DataFrameSchema(50 columns={51 colname: Column(52 properties["dtype"],53 checks=parse_check_statistics(properties["checks"]),54 nullable=properties["nullable"],55 )56 for colname, properties in df_statistics["columns"].items()57 },58 index=_create_index(df_statistics["index"]),59 coerce=True,60 )61 schema._is_inferred = True62 return schema63def infer_series_schema(series) -> SeriesSchema:64 """Infer a SeriesSchema from a pandas DataFrame.65 :param series: Series object to infer.66 :returns: SeriesSchema67 """68 series_statistics = infer_series_statistics(series)69 schema = SeriesSchema(70 dtype=series_statistics["dtype"],71 checks=parse_check_statistics(series_statistics["checks"]),72 nullable=series_statistics["nullable"],73 name=series_statistics["name"],74 coerce=True,75 )76 schema._is_inferred = True77 return schema

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