Best Python code snippet using pandera_python
io.py
Source:io.py
...27def _get_qualified_name(cls: type) -> str:28 return f"{cls.__module__}.{cls.__qualname__}"29def _serialize_check_stats(check_stats, dtype=None):30 """Serialize check statistics into json/yaml-compatible format."""31 def handle_stat_dtype(stat):32 if pandas_engine.Engine.dtype(dtypes.DateTime).check(33 dtype34 ) and hasattr(stat, "strftime"):35 # try serializing stat as a string if it's datetime-like,36 # otherwise return original value37 return stat.strftime(DATETIME_FORMAT)38 elif pandas_engine.Engine.dtype(dtypes.Timedelta).check(39 dtype40 ) and hasattr(stat, "delta"):41 # try serializing stat into an int in nanoseconds if it's42 # timedelta-like, otherwise return original value43 return stat.delta44 return stat45 # for unary checks, return a single value instead of a dictionary46 if len(check_stats) == 1:47 return handle_stat_dtype(list(check_stats.values())[0])48 # otherwise return a dictionary of keyword args needed to create the Check49 serialized_check_stats = {}50 for arg, stat in check_stats.items():51 serialized_check_stats[arg] = handle_stat_dtype(stat)52 return serialized_check_stats53def _serialize_dataframe_stats(dataframe_checks):54 """55 Serialize global dataframe check statistics into json/yaml-compatible56 format.57 """58 serialized_checks = {}59 for check_name, check_stats in dataframe_checks.items():60 # The case that `check_name` is not registered is handled in61 # `parse_checks` so we know that `check_name` exists.62 # infer dtype of statistics and serialize them63 serialized_checks[check_name] = _serialize_check_stats(check_stats)64 return serialized_checks65def _serialize_component_stats(component_stats):66 """67 Serialize column or index statistics into json/yaml-compatible format.68 """69 serialized_checks = None70 if component_stats["checks"] is not None:71 serialized_checks = {}72 for check_name, check_stats in component_stats["checks"].items():73 serialized_checks[check_name] = _serialize_check_stats(74 check_stats, component_stats["dtype"]75 )76 dtype = component_stats.get("dtype")77 if dtype:78 dtype = str(dtype)79 return {80 "dtype": dtype,81 "nullable": component_stats["nullable"],82 "checks": serialized_checks,83 **{84 key: component_stats.get(key)85 for key in [86 "name",87 "unique",88 "coerce",89 "required",90 "regex",91 ]92 if key in component_stats93 },94 }95def _serialize_schema(dataframe_schema):96 """Serialize dataframe schema into into json/yaml-compatible format."""97 from pandera import __version__ # pylint: disable=import-outside-toplevel98 statistics = get_dataframe_schema_statistics(dataframe_schema)99 columns, index, checks = None, None, None100 if statistics["columns"] is not None:101 columns = {102 col_name: _serialize_component_stats(column_stats)103 for col_name, column_stats in statistics["columns"].items()104 }105 if statistics["index"] is not None:106 index = [107 _serialize_component_stats(index_stats)108 for index_stats in statistics["index"]109 ]110 if statistics["checks"] is not None:111 checks = _serialize_dataframe_stats(statistics["checks"])112 return {113 "schema_type": "dataframe",114 "version": __version__,115 "columns": columns,116 "checks": checks,117 "index": index,118 "coerce": dataframe_schema.coerce,119 "strict": dataframe_schema.strict,120 "unique": dataframe_schema.unique,121 }122def _deserialize_check_stats(check, serialized_check_stats, dtype=None):123 def handle_stat_dtype(stat):124 try:125 if pandas_engine.Engine.dtype(dtypes.DateTime).check(dtype):126 return pd.to_datetime(stat, format=DATETIME_FORMAT)127 elif pandas_engine.Engine.dtype(dtypes.Timedelta).check(dtype):128 # serialize to int in nanoseconds129 return pd.to_timedelta(stat, unit="ns")130 except (TypeError, ValueError):131 return stat132 return stat133 if isinstance(serialized_check_stats, dict):134 # handle case where serialized check stats are in the form of a135 # dictionary mapping Check arg names to values.136 check_stats = {}137 for arg, stat in serialized_check_stats.items():138 check_stats[arg] = handle_stat_dtype(stat)139 return check(**check_stats)140 # otherwise assume unary check function signature141 return check(handle_stat_dtype(serialized_check_stats))142def _deserialize_component_stats(serialized_component_stats):143 dtype = serialized_component_stats.get("dtype")144 if dtype:145 dtype = pandas_engine.Engine.dtype(dtype)146 checks = serialized_component_stats.get("checks")147 if checks is not None:148 checks = [149 _deserialize_check_stats(150 getattr(Check, check_name), check_stats, dtype151 )152 for check_name, check_stats in checks.items()153 ]154 return {155 "dtype": dtype,...
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