KaneAI - World’s First E2E Software Testing Agent.Book a Demo Join TestMu Conference

How to use equivalents method in pandera

Best Python code snippet using pandera_python

action.py

Source:action.py

1from entities.abstract_entity import ConceptualEntity2from entities.instrument import Instrument,Pipette3from entities.apparatus import Apparatus,Thermocycler,Centrifuge,Incubator4from entities.container import Well,Container5from property import protocols as pp6from property import actions as ap7from equivalent import abstract_equivalent as ae8from equivalent import protocol_equivalent as pe9from restriction import action_recipes as ar10class Action(ConceptualEntity):11    def __init__(self,properties=[],equivalents=[],restrictions=[]):12        if equivalents == []:13            e = [pe.ActionEquivalent()]14        else:15            e = equivalents16        p = [pp.Actions(Action),17            pp.UsesApparatus(Apparatus),18            pp.UsesInstrument(Instrument)] + properties19        super().__init__(properties=p,equivalents=e,20                        restrictions=restrictions)21class Restriction(Action):22    def __init__(self,properties=[],equivalents=[],restrictions=[]):23        name = self.__class__.__name__24        e = equivalents + [ae.NameEquivalentClass(name)]25        p = properties + [pp.MayUseInstrument(default_value=Pipette),26                          pp.MayUseApparatus(default_value=Thermocycler),27                          pp.MayUseApparatus(default_value=Centrifuge),28                          pp.MayUseApparatus(default_value=Incubator)]29        super().__init__(properties=p,equivalents=e,30                        restrictions=restrictions)31class Purify(Action):32    def __init__(self,properties=[],equivalents=[],restrictions=[]):33        name = self.__class__.__name__34        e = equivalents + [ae.NameEquivalentClass(name)]35        p = properties + [pp.MayUseInstrument(default_value=Pipette),36                          pp.MayUseApparatus(default_value=Centrifuge),37                          pp.MayUseApparatus(default_value=Incubator)]38        super().__init__(properties=p,equivalents=e,39                        restrictions=restrictions)40class Bind(Action):41    def __init__(self,properties=[],equivalents=[],restrictions=[]):42        name = self.__class__.__name__43        e = equivalents + [ae.NameEquivalentClass(name)]44        p = properties + [pp.MayUseInstrument(default_value=Pipette),45                          pp.MayUseApparatus(default_value=Centrifuge)]46        super().__init__(properties=p,equivalents=e,47                        restrictions=restrictions)48class Wash(Action):49    def __init__(self,properties=[],equivalents=[],restrictions=[]):50        name = self.__class__.__name__51        e = equivalents + [ae.NameEquivalentClass(name)]52        p = properties + [pp.MayUseInstrument(default_value=Pipette),53                          pp.MayUseApparatus(default_value=Centrifuge)]54        super().__init__(properties=p,equivalents=e,55                        restrictions=restrictions)56class Elution(Action):57    def __init__(self,properties=[],equivalents=[],restrictions=[]):58        name = self.__class__.__name__59        e = equivalents + [ae.NameEquivalentClass(name)]60        p = properties + [pp.MayUseInstrument(default_value=Pipette),61                          pp.MayUseApparatus(default_value=Centrifuge),62                          pp.MayUseApparatus(default_value=Incubator)]63        super().__init__(properties=p,equivalents=e,64                        restrictions=restrictions)65class Transfer(Action):66    def __init__(self,properties=[],equivalents=[],restrictions=[]):67        name = [self.__class__.__name__.lower(),"dispense"]68        e = equivalents + [ae.NameEquivalentClass(name),69                           pe.TransferEquivalent()]70        p = properties + [ap.Source(Well),71                          ap.Destination(Well),72                          ap.Volume(),73                          pp.MayUseInstrument(default_value=Pipette)]74        r = restrictions + [ar.TransferRecipe()]75        super().__init__(properties=p,equivalents=e,76                        restrictions=restrictions)77class Seal(Action):78    def __init__(self,properties=[],equivalents=[],restrictions=[]):79        name = self.__class__.__name__.lower()80        e = equivalents + [ae.NameEquivalentClass(name)]81        p = properties + [ap.Object(Container)]82        super().__init__(properties=p,equivalents=e,83                        restrictions=restrictions)84class Unseal(Action):85    def __init__(self,properties=[],equivalents=[],restrictions=[]):86        name = self.__class__.__name__.lower()87        e = equivalents + [ae.NameEquivalentClass(name)]88        p = properties + [ap.Object(Container)]89        super().__init__(properties=p,equivalents=e,90                        restrictions=restrictions)91class Spin(Action):92    def __init__(self,properties=[],equivalents=[],restrictions=[]):93        name = self.__class__.__name__.lower()94        e = equivalents + [ae.NameEquivalentClass(name)]95        p = properties + [ap.Object(Container),96                          ap.Speed(),97                          ap.Duration(),98                          pp.MayUseApparatus(default_value=Centrifuge)]99        super().__init__(properties=p,equivalents=e,100                        restrictions=restrictions)101class SeperateGel(Action):102    def __init__(self,properties=[],equivalents=[],restrictions=[]):103        name = [self.__class__.__name__.lower(),"gel_separate"]104        e = equivalents + [ae.NameEquivalentClass(name)]105        p = properties + [ap.Source(Well),106                          ap.Duration(),107                          ap.Volume()]108        super().__init__(properties=p,equivalents=e,109                        restrictions=restrictions)110class ColonyPick(Action):111    def __init__(self,properties=[],equivalents=[],restrictions=[]):112        name = [self.__class__.__name__.lower(),"autopick"]113        e = equivalents + [ae.NameEquivalentClass(name)]114        p = properties + [ap.Source(Well),115                          ap.Destination(Well)]116        super().__init__(properties=p,equivalents=e,117                        restrictions=restrictions)118                        119class Incubate(Action):120    def __init__(self,properties=[],equivalents=[],restrictions=[]):121        name = self.__class__.__name__.lower()122        e = equivalents + [ae.NameEquivalentClass(name)]123        p = properties + [ap.Object(Container),124                          ap.Temperature(),125                          ap.Duration(),126                          pp.MayUseApparatus(default_value=Incubator)]127        super().__init__(properties=p,equivalents=e,128                        restrictions=restrictions)129class Thermocycle(Action):130    def __init__(self,properties=[],equivalents=[],restrictions=[]):131        name = self.__class__.__name__.lower()132        e = equivalents + [ae.NameEquivalentClass(name)]133        p = properties + [ap.Object(Container),134                          ap.Cycles(),135                          ap.Temperature(),136                          ap.Duration(),137                          pp.MayUseApparatus(default_value=Thermocycler)]138        super().__init__(properties=p,equivalents=e,139                        restrictions=restrictions)140class Extract(Action): # Source141    def __init__(self,properties=[],equivalents=[],restrictions=[]):142        if equivalents == []:143            e = [pe.ExtractEquivalent()]144        else:145            e = equivalents146        p = properties + [ap.Source(Well)]147        super().__init__(properties=p,equivalents=e,148                        restrictions=restrictions)149class Dispense(Action): # Location150    def __init__(self,properties=[],equivalents=[],restrictions=[]):151        if equivalents == []:152            e = [pe.DispenseEquivalent()]153        else:154            e = equivalents155        p = properties + [ap.Destination(Well)]156        super().__init__(properties=p,equivalents=e,157                        restrictions=restrictions)158class Consolidate(Action):159    def __init__(self,properties=[],equivalents=[],restrictions=[]):160        if equivalents == []:161            e = [pe.ConsolidateEquivalent()]162        else:163            e = equivalents164        super().__init__(properties=properties,equivalents=e,165                        restrictions=restrictions)166class Distribute(Action):167    def __init__(self,properties=[],equivalents=[],restrictions=[]):168        if equivalents == []:169            e = [pe.DistributeEquivalent()]170        else:171            e = equivalents172        super().__init__(properties=properties,equivalents=e,...

genetic.py

Source:genetic.py

1from entities.abstract_entity import PhysicalEntity2from equivalent import physcial_equivalent as pe3from property.property import HasPart,HasSequence4# -------------- DNA --------------5class DNA(PhysicalEntity):6    def __init__(self,equivalents=[],properties=[]):7        if equivalents == []:8            r = [pe.DNARoleEquivalent()]9        else:10            r = equivalents11        p = properties + [HasPart(PhysicalEntity),HasSequence()]12        super().__init__(equivalents=r,properties=p)13class Promoter(DNA):14    def __init__(self,equivalents=[]):15        if equivalents == []:16            r = [pe.PromoterRoleEquivalent()]17        else:18            r = equivalents19        super().__init__(equivalents=r)20class RBS(DNA):21    def __init__(self,equivalents=[]):22        if equivalents == []:23            r = [pe.RBSRoleEquivalent()]24        else:25            r = equivalents26        super().__init__(equivalents=r)27class CDS(DNA):28    def __init__(self,equivalents=[]):29        if equivalents == []:30            r = [pe.CDSRoleEquivalent()]31        else:32            r = equivalents33        super().__init__(equivalents=r)34class Terminator(DNA):35    def __init__(self,equivalents=[]):36        if equivalents == []:37            r = [pe.TerminatorRoleEquivalent()]38        else:39            r = equivalents40        super().__init__(equivalents=r)41class Gene(DNA):42    def __init__(self,equivalents=[]):43        if equivalents == []:44            r = [pe.GeneRoleEquivalent()]45        else:46            r = equivalents47        super().__init__(equivalents=r)48class Operator(DNA):49    def __init__(self,equivalents=[]):50        if equivalents == []:51            r = [pe.OperatorRoleEquivalent()]52        else:53            r = equivalents54        super().__init__(equivalents=r)55class EngineeredRegion(DNA):56    def __init__(self,equivalents=[]):57        if equivalents == []:58            r = [pe.EngineeredRegionRoleEquivalent()]59        else:60            r = equivalents61        super().__init__(equivalents=r)62class EngineeredTag(DNA):63    def __init__(self,equivalents=[]):64        if equivalents == []:65            r = [pe.EngineeredTagRoleEquivalent()]66        else:67            r = equivalents68        super().__init__(equivalents=r)69class StartCodon(DNA):70    def __init__(self,equivalents=[]):71        if equivalents == []:72            r = [pe.StartCodonRoleEquivalent()]73        else:74            r = equivalents75        super().__init__(equivalents=r)76class Tag(DNA):77    def __init__(self,equivalents=[]):78        if equivalents == []:79            r = [pe.TagRoleEquivalent()]80        else:81            r = equivalents82        super().__init__(equivalents=r)83class NonCovBindingSite(DNA):84    def __init__(self,equivalents=[]):85        if equivalents == []:86            r = [pe.NonCovBindingSiteRoleEquivalent()]87        else:88            r = equivalents89        super().__init__(equivalents=r)90class EngineeredGene(DNA):91    def __init__(self,equivalents=[]):92        if equivalents == []:93            r = [pe.EngineeredGeneRoleEquivalent()]94        else:95            r = equivalents96        super().__init__(equivalents=r)97# -------------- Complex --------------98class Complex(PhysicalEntity):99    def __init__(self,equivalents=[]):100        if equivalents == []:101            r = [pe.ComplexRoleEquivalent()]102        else:103            r = equivalents104        super().__init__(equivalents=r)105# -------------- RNA --------------106class RNA(PhysicalEntity):107    def __init__(self,equivalents=[]):108        if equivalents == []:109            r = [pe.RNARoleEquivalent()]110        else:111            r = equivalents112        super().__init__(equivalents=r)113class mRNA(RNA):114    def __init__(self,equivalents=[]):115        if equivalents == []:116            r = [pe.mRNARoleEquivalent()]117        else:118            r = equivalents119        super().__init__(equivalents=r)120class sgRNA(RNA):121    def __init__(self,equivalents=[]):122        if equivalents == []:123            r = [pe.sgRNARoleEquivalent()]124        else:125            r = equivalents...

Automation Testing Tutorials

Learn to execute automation testing from scratch with LambdaTest Learning Hub. Right from setting up the prerequisites to run your first automation test, to following best practices and diving deeper into advanced test scenarios. LambdaTest Learning Hubs compile a list of step-by-step guides to help you be proficient with different test automation frameworks i.e. Selenium, Cypress, TestNG etc.