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How to use load_module method in lisa

Best Python code snippet using lisa_python

test_plugin_registry.py

Source:test_plugin_registry.py

1import pytest2from unittest.mock import call3from asynctest import TestCase as AsyncTestCase, mock as async_mock, call4from ...config.injection_context import InjectionContext5from ...utils.classloader import ClassLoader, ModuleLoadError6from ..plugin_registry import PluginRegistry7from ..protocol_registry import ProtocolRegistry8from ..error import ProtocolDefinitionValidationError9class TestPluginRegistry(AsyncTestCase):10    def setUp(self):11        self.registry = PluginRegistry()12        self.context = InjectionContext(enforce_typing=False)13        self.proto_registry = async_mock.MagicMock(14            register_message_types=async_mock.MagicMock(),15            register_controllers=async_mock.MagicMock(),16        )17        self.context.injector.bind_instance(ProtocolRegistry, self.proto_registry)18    async def test_setup(self):19        mod_name = "test_mod"20        mod = async_mock.MagicMock()21        mod.__name__ = mod_name22        ctx = async_mock.MagicMock()23        self.registry._plugins[mod_name] = mod24        assert list(self.registry.plugin_names) == [mod_name]25        assert list(self.registry.plugins) == [mod]26        mod.setup = async_mock.CoroutineMock()27        await self.registry.init_context(ctx)28        mod.setup.assert_awaited_once_with(ctx)29    async def test_register_routes(self):30        mod_name = "test_mod"31        mod = async_mock.MagicMock()32        mod.__name__ = mod_name33        app = async_mock.MagicMock()34        self.registry._plugins[mod_name] = mod35        mod.routes.register = async_mock.CoroutineMock()36        definition = async_mock.MagicMock()37        definition.versions = [38            {39                "major_version": 1,40                "minimum_minor_version": 0,41                "current_minor_version": 0,42                "path": "v1_0",43            }44        ]45        with async_mock.patch.object(46            ClassLoader,47            "load_module",48            async_mock.MagicMock(side_effect=[definition, mod.routes]),49        ) as load_module:50            await self.registry.register_admin_routes(app)51            calls = [52                call("definition", mod_name),53                call(f"{mod_name}.{definition.versions[0]['path']}.routes"),54            ]55            load_module.assert_has_calls(calls)56        assert mod.routes.register.call_count == 157        with async_mock.patch.object(58            ClassLoader,59            "load_module",60            async_mock.MagicMock(side_effect=[definition, ModuleLoadError()]),61        ) as load_module:62            await self.registry.register_admin_routes(app)63            calls = [64                call("definition", mod_name),65                call(f"{mod_name}.{definition.versions[0]['path']}.routes"),66            ]67            load_module.assert_has_calls(calls)68        assert mod.routes.register.call_count == 169    async def test_register_routes_mod_no_version(self):70        mod_name = "test_mod"71        mod = async_mock.MagicMock()72        mod.__name__ = mod_name73        app = async_mock.MagicMock()74        self.registry._plugins[mod_name] = mod75        mod.routes.register = async_mock.CoroutineMock()76        with async_mock.patch.object(77            ClassLoader,78            "load_module",79            async_mock.MagicMock(side_effect=[None, mod.routes]),80        ) as load_module:81            await self.registry.register_admin_routes(app)82            calls = [call("definition", mod_name), call(f"{mod_name}.routes")]83            load_module.assert_has_calls(calls)84        assert mod.routes.register.call_count == 185        with async_mock.patch.object(86            ClassLoader,87            "load_module",88            async_mock.MagicMock(side_effect=[None, ModuleLoadError()]),89        ) as load_module:90            await self.registry.register_admin_routes(app)91            calls = [92                call("definition", mod_name),93                call(f"{mod_name}.routes"),94            ]95            load_module.assert_has_calls(calls)96        assert mod.routes.register.call_count == 197    async def test_post_process_routes(self):98        mod_name = "test_mod"99        mod = async_mock.MagicMock()100        mod.__name__ = mod_name101        app = async_mock.MagicMock()102        self.registry._plugins[mod_name] = mod103        mod.routes.post_process_routes = async_mock.MagicMock()104        definition = async_mock.MagicMock()105        definition.versions = [106            {107                "major_version": 1,108                "minimum_minor_version": 0,109                "current_minor_version": 0,110                "path": "v1_0",111            }112        ]113        with async_mock.patch.object(114            ClassLoader,115            "load_module",116            async_mock.MagicMock(side_effect=[definition, mod.routes]),117        ) as load_module:118            self.registry.post_process_routes(app)119            calls = [120                call("definition", mod_name),121                call(f"{mod_name}.{definition.versions[0]['path']}.routes"),122            ]123            load_module.assert_has_calls(calls)124        assert mod.routes.post_process_routes.call_count == 1125        with async_mock.patch.object(126            ClassLoader,127            "load_module",128            async_mock.MagicMock(side_effect=[definition, ModuleLoadError()]),129        ) as load_module:130            self.registry.post_process_routes(app)131            calls = [132                call("definition", mod_name),133                call(f"{mod_name}.{definition.versions[0]['path']}.routes"),134            ]135            load_module.assert_has_calls(calls)136        assert mod.routes.post_process_routes.call_count == 1137    async def test_post_process_routes_mod_no_version(self):138        mod_name = "test_mod"139        mod = async_mock.MagicMock()140        mod.__name__ = mod_name141        app = async_mock.MagicMock()142        self.registry._plugins[mod_name] = mod143        mod.routes.register = async_mock.CoroutineMock()144        with async_mock.patch.object(145            ClassLoader,146            "load_module",147            async_mock.MagicMock(side_effect=[None, mod.routes]),148        ) as load_module:149            self.registry.post_process_routes(app)150            calls = [call("definition", mod_name), call(f"{mod_name}.routes")]151            load_module.assert_has_calls(calls)152        assert mod.routes.post_process_routes.call_count == 1153        with async_mock.patch.object(154            ClassLoader,155            "load_module",156            async_mock.MagicMock(side_effect=[None, ModuleLoadError()]),157        ) as load_module:158            self.registry.post_process_routes(app)159            calls = [call("definition", mod_name), call(f"{mod_name}.routes")]160            load_module.assert_has_calls(calls)161        assert mod.routes.post_process_routes.call_count == 1162    async def test_validate_version_not_a_list(self):163        mod_name = "test_mod"164        mod = async_mock.MagicMock()165        mod.__name__ = mod_name166        versions_not_a_list = {}167        with async_mock.patch.object(168            ClassLoader, "load_module", async_mock.MagicMock()169        ) as load_module:170            with pytest.raises(ProtocolDefinitionValidationError):171                self.registry.validate_version(versions_not_a_list, mod_name)172    async def test_validate_version_list_element_not_an_object(self):173        mod_name = "test_mod"174        mod = async_mock.MagicMock()175        mod.__name__ = mod_name176        versions = [{}, []]177        with async_mock.patch.object(178            ClassLoader, "load_module", async_mock.MagicMock()179        ) as load_module:180            with pytest.raises(ProtocolDefinitionValidationError):181                self.registry.validate_version(versions, mod_name)182    async def test_validate_version_list_element_empty(self):183        mod_name = "test_mod"184        mod = async_mock.MagicMock()185        mod.__name__ = mod_name186        versions = []187        with async_mock.patch.object(188            ClassLoader, "load_module", async_mock.MagicMock()189        ) as load_module:190            with pytest.raises(ProtocolDefinitionValidationError):191                self.registry.validate_version(versions, mod_name)192    async def test_validate_version_list_missing_attribute(self):193        mod_name = "test_mod"194        mod = async_mock.MagicMock()195        mod.__name__ = mod_name196        versions = [197            {198                "major_version": 1,199                "minimum_minor_version": 0,200                "current_minor_version": 0,201                # "path": "v1_0", # missing202            }203        ]204        with async_mock.patch.object(205            ClassLoader, "load_module", async_mock.MagicMock()206        ) as load_module:207            with pytest.raises(ProtocolDefinitionValidationError):208                self.registry.validate_version(versions, mod_name)209    async def test_validate_version_negative_version(self):210        mod_name = "test_mod"211        mod = async_mock.MagicMock()212        mod.__name__ = mod_name213        versions = [214            {215                "major_version": -1,216                "minimum_minor_version": 0,217                "current_minor_version": 0,218                "path": "v1_0",219            }220        ]221        with async_mock.patch.object(222            ClassLoader, "load_module", async_mock.MagicMock()223        ) as load_module:224            with pytest.raises(ProtocolDefinitionValidationError):225                self.registry.validate_version(versions, mod_name)226    async def test_validate_version_min_greater_current(self):227        mod_name = "test_mod"228        mod = async_mock.MagicMock()229        mod.__name__ = mod_name230        versions = [231            {232                "major_version": 1,233                "minimum_minor_version": 1,234                "current_minor_version": 0,235                "path": "v1_0",236            }237        ]238        with async_mock.patch.object(239            ClassLoader, "load_module", async_mock.MagicMock()240        ) as load_module:241            with pytest.raises(ProtocolDefinitionValidationError):242                self.registry.validate_version(versions, mod_name)243    async def test_validate_version_multiple_major(self):244        mod_name = "test_mod"245        mod = async_mock.MagicMock()246        mod.__name__ = mod_name247        versions = [248            {249                "major_version": 1,250                "minimum_minor_version": 0,251                "current_minor_version": 0,252                "path": "v1_0",253            },254            {255                "major_version": 1,256                "minimum_minor_version": 0,257                "current_minor_version": 1,258                "path": "v1_1",259            },260        ]261        with async_mock.patch.object(262            ClassLoader, "load_module", async_mock.MagicMock()263        ) as load_module:264            with pytest.raises(ProtocolDefinitionValidationError):265                self.registry.validate_version(versions, mod_name)266    async def test_validate_version_bad_path(self):267        mod_name = "test_mod"268        mod = async_mock.MagicMock()269        mod.__name__ = mod_name270        versions = [271            {272                "major_version": 1,273                "minimum_minor_version": 1,274                "current_minor_version": 0,275                "path": "v1_0",276            }277        ]278        with async_mock.patch.object(279            ClassLoader, "load_module", async_mock.MagicMock(return_value=None)280        ) as load_module:281            with pytest.raises(ProtocolDefinitionValidationError):282                self.registry.validate_version(versions, mod_name)283    async def test_validate_version_list_correct(self):284        mod_name = "test_mod"285        mod = async_mock.MagicMock()286        mod.__name__ = mod_name287        versions = [288            {289                "major_version": 1,290                "minimum_minor_version": 0,291                "current_minor_version": 0,292                "path": "v1_0",293            },294            {295                "major_version": 2,296                "minimum_minor_version": 0,297                "current_minor_version": 0,298                "path": "v2_0",299            },300        ]301        with async_mock.patch.object(302            ClassLoader, "load_module", async_mock.MagicMock()303        ) as load_module:304            assert self.registry.validate_version(versions, mod_name) is True305            load_module.has_calls(306                call(versions[0]["path"], mod_name),307                call(versions[1]["path"], mod_name),308            )309    async def test_validate_version_list_extra_attributes_ok(self):310        mod_name = "test_mod"311        mod = async_mock.MagicMock()312        mod.__name__ = mod_name313        versions = [314            {315                "major_version": 1,316                "minimum_minor_version": 0,317                "current_minor_version": 0,318                "path": "v1_0",319                "not": "an attribute",320            }321        ]322        with async_mock.patch.object(323            ClassLoader, "load_module", async_mock.MagicMock()324        ) as load_module:325            assert self.registry.validate_version(versions, mod_name) is True326    async def test_validate_version_no_such_mod(self):327        mod_name = "no_mod"328        mod = async_mock.MagicMock()329        mod.__name__ = mod_name330        versions = [331            {332                "major_version": 1,333                "minimum_minor_version": 0,334                "current_minor_version": 0,335                "path": "v1_0",336            }337        ]338        with async_mock.patch.object(339            ClassLoader, "load_module", async_mock.MagicMock()340        ) as load_module:341            load_module.return_value = None342            with self.assertRaises(ProtocolDefinitionValidationError):343                self.registry.validate_version(versions, mod_name)344    async def test_register_plugin_already_present(self):345        mod_name = "test_mod"346        mod = async_mock.MagicMock()347        self.registry._plugins[mod_name] = mod348        assert mod == self.registry.register_plugin(mod_name)349    async def test_register_plugin_load_x(self):350        with async_mock.patch.object(351            ClassLoader, "load_module", async_mock.MagicMock()352        ) as load_module:353            load_module.side_effect = ModuleLoadError("failure to load")354            assert self.registry.register_plugin("dummy") is None355    async def test_register_plugin_no_mod(self):356        with async_mock.patch.object(357            ClassLoader, "load_module", async_mock.MagicMock()358        ) as load_module:359            load_module.return_value = None360            assert self.registry.register_plugin("dummy") is None361    async def test_register_plugin_no_definition(self):362        class MODULE:363            no_setup = "no setup attr"364        obj = MODULE()365        with async_mock.patch.object(366            ClassLoader, "load_module", async_mock.MagicMock()367        ) as load_module:368            load_module.side_effect = [369                obj,  # module370                None,  # routes371                None,  # message types372                None,  # definition373            ]374            assert self.registry.register_plugin("dummy") is None375    async def test_register_plugin_no_versions(self):376        class MODULE:377            no_setup = "no setup attr"378        obj = MODULE()379        with async_mock.patch.object(380            ClassLoader, "load_module", async_mock.MagicMock()381        ) as load_module:382            load_module.side_effect = [383                obj,  # module384                None,  # routes385                None,  # message types386                "str-has-no-versions-attr",  # definition without versions attr387            ]388            assert self.registry.register_plugin("dummy") is None389    async def test_register_plugin_has_setup(self):390        class MODULE:391            setup = "present"392        obj = MODULE()393        with async_mock.patch.object(394            ClassLoader, "load_module", async_mock.MagicMock()395        ) as load_module:396            load_module.side_effect = [397                obj,  # module398                None,  # routes399                None,  # message types400                None,  # definition without versions attr401            ]402            assert self.registry.register_plugin("dummy") == obj403    async def test_register_definitions_malformed(self):404        class MODULE:405            no_setup = "no setup attr"406        obj = MODULE()407        with async_mock.patch.object(408            ClassLoader, "load_module", async_mock.MagicMock()409        ) as load_module:410            load_module.side_effect = [411                obj,  # module412                None,  # routes413                None,  # message types414                async_mock.MagicMock(versions="not-a-list"),415            ]416            assert self.registry.register_plugin("dummy") is None417    async def test_register_package_x(self):418        with async_mock.patch.object(419            ClassLoader, "scan_subpackages", async_mock.MagicMock()420        ) as load_module:421            load_module.side_effect = ModuleLoadError()422            assert not self.registry.register_package("dummy")423    async def test_load_protocols_load_x(self):424        mock_plugin = async_mock.MagicMock(__name__="dummy")425        with async_mock.patch.object(426            ClassLoader, "load_module", async_mock.MagicMock()427        ) as load_module:428            load_module.side_effect = ModuleLoadError()429            await self.registry.load_protocols(None, mock_plugin)430            assert load_module.call_count == 1431    async def test_load_protocols_load_mod(self):432        mock_plugin = async_mock.MagicMock(__name__="dummy")433        mock_mod = async_mock.MagicMock()434        mock_mod.MESSAGE_TYPES = async_mock.MagicMock()435        mock_mod.CONTROLLERS = async_mock.MagicMock()436        with async_mock.patch.object(437            ClassLoader, "load_module", async_mock.MagicMock()438        ) as load_module:439            load_module.return_value = mock_mod440            await self.registry.load_protocols(self.context, mock_plugin)441    async def test_load_protocols_no_mod_load_x(self):442        mock_plugin = async_mock.MagicMock(__name__="dummy")443        with async_mock.patch.object(444            ClassLoader, "load_module", async_mock.MagicMock()445        ) as load_module:446            load_module.side_effect = [None, ModuleLoadError()]447            await self.registry.load_protocols(self.context, mock_plugin)448            assert load_module.call_count == 2449    async def test_load_protocols_no_mod_def_no_message_types(self):450        mock_plugin = async_mock.MagicMock(__name__="dummy")451        mock_def = async_mock.MagicMock(452            versions=[453                {454                    "major_version": 1,455                    "minimum_minor_version": 0,456                    "current_minor_version": 0,457                    "path": "v1_0",458                }459            ]460        )461        with async_mock.patch.object(462            ClassLoader, "load_module", async_mock.MagicMock()463        ) as load_module:464            load_module.side_effect = [None, mock_def, ModuleLoadError()]465            await self.registry.load_protocols(self.context, mock_plugin)466            assert load_module.call_count == 3467    async def test_load_protocols_no_mod_def_message_types(self):468        mock_plugin = async_mock.MagicMock(__name__="dummy")469        mock_def = async_mock.MagicMock(470            versions=[471                {472                    "major_version": 1,473                    "minimum_minor_version": 0,474                    "current_minor_version": 0,475                    "path": "v1_0",476                },477                {478                    "major_version": 2,479                    "minimum_minor_version": 0,480                    "current_minor_version": 0,481                    "path": "v2_0",482                },483            ]484        )485        mock_mod = async_mock.MagicMock()486        mock_mod.MESSAGE_TYPES = async_mock.MagicMock()487        mock_mod.CONTROLLERS = async_mock.MagicMock()488        with async_mock.patch.object(489            ClassLoader, "load_module", async_mock.MagicMock()490        ) as load_module:491            load_module.side_effect = [None, mock_def, mock_mod, mock_mod]492            await self.registry.load_protocols(self.context, mock_plugin)493            assert load_module.call_count == 4494    def test_repr(self):...

test_all_examples.py

Source:test_all_examples.py

1import numpy as np2from .utils import TestUtils3def test__acados__cube():4    bioptim_folder = TestUtils.bioptim_folder()5    module = TestUtils.load_module(bioptim_folder + "/examples/acados/cube.py")6    module.prepare_ocp(biorbd_model_path=bioptim_folder + "/examples/acados/cube.bioMod", n_shooting=10, tf=2)7def test__acados__pendulum():8    bioptim_folder = TestUtils.bioptim_folder()9    module = TestUtils.load_module(bioptim_folder + "/examples/acados/pendulum.py")10    module.prepare_ocp(11        biorbd_model_path=bioptim_folder + "/examples/acados/pendulum.bioMod", n_shooting=41, final_time=312    )13def test__acados__static_arm():14    bioptim_folder = TestUtils.bioptim_folder()15    module = TestUtils.load_module(bioptim_folder + "/examples/acados/static_arm.py")16    module.prepare_ocp(17        biorbd_model_path=bioptim_folder + "/examples/acados/arm26.bioMod",18        final_time=2,19        x_warm=None,20        n_shooting=51,21        use_sx=False,22        n_threads=6,23    )24def test__getting_started__custom_bounds():25    bioptim_folder = TestUtils.bioptim_folder()26    module = TestUtils.load_module(bioptim_folder + "/examples/getting_started/custom_bounds.py")27    module.prepare_ocp(28        biorbd_model_path=bioptim_folder + "/examples/getting_started/cube.bioMod", n_shooting=30, final_time=229    )30def test__getting_started__custom_constraints():31    bioptim_folder = TestUtils.bioptim_folder()32    module = TestUtils.load_module(bioptim_folder + "/examples/getting_started/custom_constraint.py")33    module.prepare_ocp(34        biorbd_model_path=bioptim_folder + "/examples/getting_started/cube.bioMod",35    )36def test__getting_started__custom_dynamics():37    bioptim_folder = TestUtils.bioptim_folder()38    dynamics = TestUtils.load_module(bioptim_folder + "/examples/getting_started/custom_dynamics.py")39    dynamics.prepare_ocp(40        biorbd_model_path=bioptim_folder + "/examples/getting_started/cube.bioMod",41    )42def test__getting_started__custom_initial_guess():43    bioptim_folder = TestUtils.bioptim_folder()44    module = TestUtils.load_module(bioptim_folder + "/examples/getting_started/custom_initial_guess.py")45    module.prepare_ocp(46        biorbd_model_path=bioptim_folder + "/examples/getting_started/cube.bioMod", n_shooting=30, final_time=247    )48def test__getting_started__custom_objectives():49    bioptim_folder = TestUtils.bioptim_folder()50    module = TestUtils.load_module(bioptim_folder + "/examples/getting_started/custom_objectives.py")51    module.prepare_ocp(52        biorbd_model_path=bioptim_folder + "/examples/getting_started/cube.bioMod",53    )54def test__getting_started__custom_parameters():55    bioptim_folder = TestUtils.bioptim_folder()56    module = TestUtils.load_module(bioptim_folder + "/examples/getting_started/custom_parameters.py")57    module.prepare_ocp(58        biorbd_model_path=bioptim_folder + "/examples/getting_started/pendulum.bioMod",59        final_time=3,60        n_shooting=100,61        optim_gravity=True,62        optim_mass=True,63        min_g=np.array([-1, -1, -10]),64        max_g=np.array([1, 1, -5]),65        min_m=10,66        max_m=30,67        target_g=np.array([0, 0, -9.81]),68        target_m=20,69    )70def test__getting_started__custom_phase_transitions():71    bioptim_folder = TestUtils.bioptim_folder()72    module = TestUtils.load_module(bioptim_folder + "/examples/getting_started/custom_phase_transitions.py")73    module.prepare_ocp(biorbd_model_path=bioptim_folder + "/examples/getting_started/cube.bioMod")74def test__getting_started__custom_plotting():75    bioptim_folder = TestUtils.bioptim_folder()76    module = TestUtils.load_module(bioptim_folder + "/examples/getting_started/custom_plotting.py")77    module.prepare_ocp(78        biorbd_model_path=bioptim_folder + "/examples/getting_started/pendulum.bioMod", final_time=2, n_shooting=5079    )80def test__getting_started__example_cyclic_movement():81    bioptim_folder = TestUtils.bioptim_folder()82    module = TestUtils.load_module(bioptim_folder + "/examples/getting_started/example_cyclic_movement.py")83    module.prepare_ocp(84        biorbd_model_path=bioptim_folder + "/examples/getting_started/cube.bioMod",85        n_shooting=30,86        final_time=2,87        loop_from_constraint=True,88    )89def test__getting_started__example_external_forces():90    bioptim_folder = TestUtils.bioptim_folder()91    module = TestUtils.load_module(bioptim_folder + "/examples/getting_started/example_external_forces.py")92    module.prepare_ocp(biorbd_model_path=bioptim_folder + "/examples/getting_started/cube_with_forces.bioMod")93def test__getting_started__example_inequality_constraint():94    bioptim_folder = TestUtils.bioptim_folder()95    module = TestUtils.load_module(bioptim_folder + "/examples/getting_started/example_inequality_constraint.py")96    module.prepare_ocp(97        biorbd_model_path=bioptim_folder + "/examples/torque_driven_ocp/2segments_4dof_2contacts.bioMod",98        phase_time=0.3,99        n_shooting=10,100        min_bound=50,101        max_bound=np.inf,102        mu=0.2,103    )104def test__getting_started__example_mapping():105    bioptim_folder = TestUtils.bioptim_folder()106    TestUtils.load_module(bioptim_folder + "/examples/getting_started/example_mapping.py")107def test__getting_started__example_multiphase():108    bioptim_folder = TestUtils.bioptim_folder()109    module = TestUtils.load_module(bioptim_folder + "/examples/getting_started/example_multiphase.py")110    module.prepare_ocp(biorbd_model_path=bioptim_folder + "/examples/getting_started/cube.bioMod", long_optim=True)111def test__getting_started__example_optimal_time():112    bioptim_folder = TestUtils.bioptim_folder()113    TestUtils.load_module(bioptim_folder + "/examples/getting_started/example_optimal_time.py")114def test__getting_started__example_save_and_load():115    bioptim_folder = TestUtils.bioptim_folder()116    module = TestUtils.load_module(bioptim_folder + "/examples/getting_started/example_save_and_load.py")117    module.prepare_ocp(118        biorbd_model_path=bioptim_folder + "/examples/getting_started/pendulum.bioMod",119        final_time=3,120        n_shooting=100,121        n_threads=4,122    )123def test__getting_started__example_simulation():124    bioptim_folder = TestUtils.bioptim_folder()125    TestUtils.load_module(bioptim_folder + "/examples/getting_started/example_optimal_time.py")126def test__getting_started__pendulum():127    bioptim_folder = TestUtils.bioptim_folder()128    module = TestUtils.load_module(bioptim_folder + "/examples/getting_started/pendulum.py")129    module.prepare_ocp(130        biorbd_model_path=bioptim_folder + "/examples/getting_started/pendulum.bioMod", final_time=3, n_shooting=100131    )132def test__moving_horizon_estimation__mhe():133    bioptim_folder = TestUtils.bioptim_folder()134    TestUtils.load_module(bioptim_folder + "/examples/moving_horizon_estimation/mhe.py")135    # Todo: Complete when the example is more clear136def test__muscle_driven_ocp__muscle_activations_tracker():137    bioptim_folder = TestUtils.bioptim_folder()138    TestUtils.load_module(bioptim_folder + "/examples/muscle_driven_ocp/muscle_activations_tracker.py")139def test__muscle_driven_ocp__muscle_excitations_tracker():140    bioptim_folder = TestUtils.bioptim_folder()141    TestUtils.load_module(bioptim_folder + "/examples/muscle_driven_ocp/muscle_excitations_tracker.py")142def test__muscle_driven_ocp__static_arm():143    bioptim_folder = TestUtils.bioptim_folder()144    module = TestUtils.load_module(bioptim_folder + "/examples/muscle_driven_ocp/static_arm.py")145    module.prepare_ocp(146        biorbd_model_path=bioptim_folder + "/examples/muscle_driven_ocp/arm26.bioMod",147        final_time=3,148        n_shooting=50,149        weight=1000,150    )151def test__muscle_driven_ocp__static_arm_with_contact():152    bioptim_folder = TestUtils.bioptim_folder()153    module = TestUtils.load_module(bioptim_folder + "/examples/muscle_driven_ocp/static_arm_with_contact.py")154    module.prepare_ocp(155        biorbd_model_path=bioptim_folder + "/examples/muscle_driven_ocp/arm26_with_contact.bioMod",156        final_time=3,157        n_shooting=50,158        weight=1000,159    )160def test__muscle_driven_with_contact__contact_forces_inequality_constraint_muscle():161    bioptim_folder = TestUtils.bioptim_folder()162    module = TestUtils.load_module(163        bioptim_folder + "/examples/muscle_driven_with_contact/contact_forces_inequality_constraint_muscle.py"164    )165    module.prepare_ocp(166        biorbd_model_path=bioptim_folder167        + "/examples/muscle_driven_with_contact/2segments_4dof_2contacts_1muscle.bioMod",168        phase_time=0.3,169        n_shooting=10,170        min_bound=50,171        max_bound=np.inf,172    )173def test__muscle_driven_with_contact__contact_forces_inequality_constraint_muscle_excitations():174    bioptim_folder = TestUtils.bioptim_folder()175    module = TestUtils.load_module(176        bioptim_folder177        + "/examples/muscle_driven_with_contact/contact_forces_inequality_constraint_muscle_excitations.py"178    )179    module.prepare_ocp(180        biorbd_model_path=bioptim_folder181        + "/examples/muscle_driven_with_contact/2segments_4dof_2contacts_1muscle.bioMod",182        phase_time=0.3,183        n_shooting=10,184        min_bound=50,185    )186def test__muscle_driven_with_contact__muscle_activations_contacts_tracker():187    bioptim_folder = TestUtils.bioptim_folder()188    module = TestUtils.load_module(189        bioptim_folder + "/examples/muscle_driven_with_contact/muscle_activations_contacts_tracker.py"190    )191def test__optimal_time_ocp__multiphase_time_constraint():192    bioptim_folder = TestUtils.bioptim_folder()193    module = TestUtils.load_module(bioptim_folder + "/examples/optimal_time_ocp/multiphase_time_constraint.py")194    final_time = [2, 5, 4]195    time_min = [1, 3, 0.1]196    time_max = [2, 4, 0.8]197    ns = [20, 30, 20]198    module.prepare_ocp(199        biorbd_model_path=bioptim_folder + "/examples/optimal_time_ocp/cube.bioMod",200        final_time=final_time,201        time_min=time_min,202        time_max=time_max,203        n_shooting=ns,204    )205def test__optimal_time_ocp__pendulum_min_time_Lagrange():206    bioptim_folder = TestUtils.bioptim_folder()207    module = TestUtils.load_module(bioptim_folder + "/examples/optimal_time_ocp/pendulum_min_time_Lagrange.py")208    module.prepare_ocp(209        biorbd_model_path=bioptim_folder + "/examples/optimal_time_ocp/pendulum.bioMod",210        final_time=2,211        n_shooting=50,212    )213def test__optimal_time_ocp__pendulum_min_time_Mayer():214    bioptim_folder = TestUtils.bioptim_folder()215    module = TestUtils.load_module(bioptim_folder + "/examples/optimal_time_ocp/pendulum_min_time_Mayer.py")216    module.prepare_ocp(217        biorbd_model_path=bioptim_folder + "/examples/optimal_time_ocp/pendulum.bioMod",218        final_time=2,219        n_shooting=50,220    )221def test__optimal_time_ocp__time_constraint():222    bioptim_folder = TestUtils.bioptim_folder()223    module = TestUtils.load_module(bioptim_folder + "/examples/optimal_time_ocp/time_constraint.py")224    module.prepare_ocp(225        biorbd_model_path=bioptim_folder + "/examples/optimal_time_ocp/pendulum.bioMod",226        final_time=2,227        n_shooting=50,228        time_min=0.6,229        time_max=1,230    )231def test__symmetrical_torque_driven_ocp__symmetry_by_constraint():232    bioptim_folder = TestUtils.bioptim_folder()233    module = TestUtils.load_module(bioptim_folder + "/examples/symmetrical_torque_driven_ocp/symmetry_by_constraint.py")234    module.prepare_ocp(235        biorbd_model_path=bioptim_folder + "/examples/symmetrical_torque_driven_ocp/cubeSym.bioMod",236    )237def test__symmetrical_torque_driven_ocp__symmetry_by_mapping():238    bioptim_folder = TestUtils.bioptim_folder()239    module = TestUtils.load_module(bioptim_folder + "/examples/symmetrical_torque_driven_ocp/symmetry_by_mapping.py")240    module.prepare_ocp(241        biorbd_model_path=bioptim_folder + "/examples/symmetrical_torque_driven_ocp/cubeSym.bioMod",242    )243def test__torque_driven_ocp__maximize_predicted_height_CoM():244    bioptim_folder = TestUtils.bioptim_folder()245    module = TestUtils.load_module(bioptim_folder + "/examples/torque_driven_ocp/maximize_predicted_height_CoM.py")246    module.prepare_ocp(247        biorbd_model_path=bioptim_folder + "/examples/torque_driven_ocp/2segments_4dof_2contacts.bioMod",248        phase_time=0.5,249        n_shooting=20,250        use_actuators=False,251        objective_name="MINIMIZE_COM_VELOCITY",252        com_constraints=True,253    )254def test__torque_driven_ocp__spring_load():255    bioptim_folder = TestUtils.bioptim_folder()256    module = TestUtils.load_module(bioptim_folder + "/examples/torque_driven_ocp/spring_load.py")257    module.prepare_ocp(biorbd_model_path=bioptim_folder + "/examples/torque_driven_ocp/mass_point.bioMod")258def test__torque_driven_ocp__track_markers_2D_pendulum():259    bioptim_folder = TestUtils.bioptim_folder()260    TestUtils.load_module(bioptim_folder + "/examples/torque_driven_ocp/track_markers_2D_pendulum.py")261def test__torque_driven_ocp__track_markers_with_torque_actuators():262    bioptim_folder = TestUtils.bioptim_folder()263    module = TestUtils.load_module(264        bioptim_folder + "/examples/torque_driven_ocp/track_markers_with_torque_actuators.py"265    )266    module.prepare_ocp(267        biorbd_model_path=bioptim_folder + "/examples/torque_driven_ocp/cube.bioMod",268        n_shooting=30,269        final_time=2,270        actuator_type=1,271    )272def test__torque_driven_ocp__trampo_quaternions():273    bioptim_folder = TestUtils.bioptim_folder()274    module = TestUtils.load_module(bioptim_folder + "/examples/torque_driven_ocp/trampo_quaternions.py")275    module.prepare_ocp(276        biorbd_model_path=bioptim_folder + "/examples/torque_driven_ocp/TruncAnd2Arm_Quaternion.bioMod",277        n_shooting=5,278        final_time=0.25,279    )280def test__track__track_marker_on_segment():281    bioptim_folder = TestUtils.bioptim_folder()282    module = TestUtils.load_module(bioptim_folder + "/examples/track/track_marker_on_segment.py")283    module.prepare_ocp(284        biorbd_model_path=bioptim_folder + "/examples/track/cube_and_line.bioMod",285        n_shooting=30,286        final_time=2,287        initialize_near_solution=True,288    )289def test__track__track_segment_on_rt():290    bioptim_folder = TestUtils.bioptim_folder()291    module = TestUtils.load_module(bioptim_folder + "/examples/track/track_segment_on_rt.py")292    module.prepare_ocp(293        biorbd_model_path=bioptim_folder + "/examples/track/cube_and_line.bioMod",294        n_shooting=30,295        final_time=1,...

test_module1.py

Source:test_module1.py

...14    path_import = extensions.from_imports("pathlib", "Path")15    assert path_import, "Are you importing `Path` from `pathlib`?"16@pytest.mark.test_extensions_sys_path_module117def test_extensions_sys_path_module1(parse):18    # def load_module(directory, name):19    #     sys.path.insert(0, directory)20    extensions = parse("extensions")21    assert extensions.success, extensions.message22    load_module = extensions.defines("load_module")23    load_module_exists = load_module.exists()24    assert load_module_exists, "Are you defining a function called `load_module`?"25    load_module.has_arg("directory")26    arguments_exist = load_module.has_arg("directory") and load_module.has_arg(27        "name", 128    )29    assert (30        arguments_exist31    ), "Does the `load_module` function have the correct arguments?"32    insert_call_exists = (33        load_module.calls()34        .match(35            {36                "value_func_value_value_id": "sys",37                "value_func_value_attr": "path",38                "value_func_attr": "insert",39                "value_args_0_value": 0,40                "value_args_1_id": "directory",41            }42        )43        .exists()44    )45    assert (46        insert_call_exists47    ), "Are you calling `sys.path.insert` and passing the correct parameters?"48@pytest.mark.test_extensions_import_pop_module149def test_extensions_import_pop_module1(parse):50    #     importlib.import_module(name)51    #     sys.path.pop(0)52    extensions = parse("extensions")53    assert extensions.success, extensions.message54    load_module = extensions.defines("load_module")55    load_module_exists = load_module.exists()56    assert load_module_exists, "Are you defining a function called `load_module`?"57    import_module_call_exists = (58        load_module.calls()59        .match(60            {61                "value_func_value_id": "importlib",62                "value_func_attr": "import_module",63                "value_args_0_id": "name",64            }65        )66        .exists()67    )68    assert (69        import_module_call_exists70    ), "Are you calling `importlib.import_module` and passing the correct parameters?"71    pop_call_exists = (72        load_module.calls()73        .match(74            {75                "value_func_value_value_id": "sys",76                "value_func_value_attr": "path",77                "value_func_attr": "pop",78                "value_args_0_value": 0,79            }80        )81        .exists()82    )83    assert (84        pop_call_exists85    ), "Are you calling `sys.path.pop` and passing the correct parameters?"86@pytest.mark.test_extensions_load_directory_module187def test_extensions_load_directory_module1(parse):88    # def load_directory(directory):89    #     for path in directory.rglob("*.py"):90    #         load_module(directory.as_posix(), path.stem)91    extensions = parse("extensions")92    assert extensions.success, extensions.message93    load_directory = extensions.defines("load_directory")94    load_directory_exists = load_directory.exists()95    assert load_directory_exists, "Are you defining a function called `load_directory`?"96    arguments_exist = load_directory.has_arg("directory")97    assert (98        arguments_exist99    ), "Does the `load_directory` function have the correct arguments?"100    for_exists = (101        load_directory.for_()102        .match(103            {104                "target_id": "path",...

test_loader.py

Source:test_loader.py

...6import sys7import types8import unittest9class LoaderTests(abc.LoaderTests):10    """Test load_module() for extension modules."""11    def setUp(self):12        self.loader = self.machinery.ExtensionFileLoader(ext_util.NAME,13                                                         ext_util.FILEPATH)14    def load_module(self, fullname):15        return self.loader.load_module(fullname)16    def test_load_module_API(self):17        # Test the default argument for load_module().18        self.loader.load_module()19        self.loader.load_module(None)20        with self.assertRaises(ImportError):21            self.load_module('XXX')22    def test_equality(self):23        other = self.machinery.ExtensionFileLoader(ext_util.NAME,24                                                   ext_util.FILEPATH)25        self.assertEqual(self.loader, other)26    def test_inequality(self):27        other = self.machinery.ExtensionFileLoader('_' + ext_util.NAME,28                                                   ext_util.FILEPATH)29        self.assertNotEqual(self.loader, other)30    def test_module(self):31        with util.uncache(ext_util.NAME):32            module = self.load_module(ext_util.NAME)33            for attr, value in [('__name__', ext_util.NAME),34                                ('__file__', ext_util.FILEPATH),35                                ('__package__', '')]:36                self.assertEqual(getattr(module, attr), value)37            self.assertIn(ext_util.NAME, sys.modules)38            self.assertIsInstance(module.__loader__,39                                  self.machinery.ExtensionFileLoader)40    # No extension module as __init__ available for testing.41    test_package = None42    # No extension module in a package available for testing.43    test_lacking_parent = None44    def test_module_reuse(self):45        with util.uncache(ext_util.NAME):46            module1 = self.load_module(ext_util.NAME)47            module2 = self.load_module(ext_util.NAME)48            self.assertIs(module1, module2)49    # No easy way to trigger a failure after a successful import.50    test_state_after_failure = None51    def test_unloadable(self):52        name = 'asdfjkl;'53        with self.assertRaises(ImportError) as cm:54            self.load_module(name)55        self.assertEqual(cm.exception.name, name)56    def test_is_package(self):57        self.assertFalse(self.loader.is_package(ext_util.NAME))58        for suffix in self.machinery.EXTENSION_SUFFIXES:59            path = os.path.join('some', 'path', 'pkg', '__init__' + suffix)60            loader = self.machinery.ExtensionFileLoader('pkg', path)61            self.assertTrue(loader.is_package('pkg'))62Frozen_LoaderTests, Source_LoaderTests = util.test_both(63        LoaderTests, machinery=machinery)64if __name__ == '__main__':...

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