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How to use splat method in hypothesis
Best Python code snippet using hypothesis
test_core.py
Source:test_core.py 
1# -*- coding: utf-8 -*-2from __future__ import print_function3# this is the test function set for splat core functions4# imports - internal5import copy6import glob7import os8# # imports - external9import numpy10from astropy import units as u # standard units11from astropy import constants as const # physical constants in SI units12from astropy.io import fits13from numpy.testing.utils import assert_allclose14# splat functions and constants15from ..initialize import *16from ..utilities import *17from .. import core as splat18#####################19# TESTING FUNCTIONS #20#####################21def test_read():22# readSpectrum23 file = splat.SPLAT_PATH+splat.DATA_FOLDER+'10001_10443.fits'24 dstr = splat.readSpectrum(file)25 assert 'wave' in list(dstr.keys())26 assert 'flux' in list(dstr.keys())27 assert 'noise' in list(dstr.keys())28 assert 'header' in list(dstr.keys())29 assert len(dstr['wave']) > 030 assert len(dstr['flux']) > 031 assert len(dstr['noise']) > 032 assert type(dstr['header']) == fits.header.Header33def test_spectrum_class():34# Spectrum class35# __init__36# __copy__37# copy38# info39# export40# save41 ofile = splat.TMPFILENAME+'.fits'42 s = splat.Spectrum(10001)43 s2 = s.copy()44 assert_allclose(s2.flux[0].value,s.flux[0].value)45 assert isinstance(s.info(printout=False),str)46 if len(glob.glob(ofile)) > 0:47 os.remove(ofile)48 s.export(ofile)49 s2 = splat.Spectrum(filename=ofile)50 assert_allclose(s2.flux[0].value,s.flux[0].value)51 os.remove(ofile)52 s.save(ofile)53 s2 = splat.Spectrum(filename=ofile)54 assert_allclose(s2.flux[0].value,s.flux[0].value)55 os.remove(ofile)56def test_spectrum_trim():57# waverange58# trim59 s = splat.Spectrum(10001)60 assert_allclose(s.waveRange()[0].value,0.6450077295303345)61 un = s.waveRange()[0].unit62 s.trim([1.0,2.0])63 assert_allclose(s.waveRange()[0].value,1.0,rtol=1.e-2)64 assert_allclose(s.waveRange()[1].value,2.0,rtol=1.e-2)65 assert s.waveRange()[0].unit == un66 s.reset()67 assert_allclose(s.waveRange()[0].value,0.6450077295303345)68 assert s.waveRange()[0].unit == un69 70def test_spectrum_math():71# Spectrum class72# __add__73# __sub__74# __mul__75# __div__76 s1 = splat.Spectrum(10001)77 s1.normalize()78 assert_allclose(s1.fluxMax().value,1.)79 s2 = splat.Spectrum(10001)80 s2.normalize()81 assert_allclose(s2.fluxMax().value,1.)82 assert s1.flux.unit == s2.flux.unit83 s3 = s1+s284 assert_allclose(s3.fluxMax().value,2.)85 assert s3.flux.unit == s1.flux.unit86 assert_allclose(s3.snr,s1.snr*(2.**0.5))87 s4 = s3-s188 assert_allclose(s4.fluxMax().value,1.)89 assert s4.flux.unit == s1.flux.unit90 assert_allclose(s4.snr,s1.snr/(3.**0.5))91 s5 = s1*s292 assert_allclose(s5.fluxMax().value,1.)93 assert s5.flux.unit == s1.flux.unit**294 assert s5.snr < s1.snr95#96# NOTE: THIS IS NOT WORKING AT THE MOMENT97#98 s6 = s3/s199 assert_allclose(s6.fluxMax().value,2.)100 assert s6.flux.unit == s1.flux.unit/s1.flux.unit101 102def test_spectrum_scaling():103# normalize104# scale105# computeSN106# fluxCalibrate107# fluxMax108# reset109 s = splat.Spectrum(10001)110 omx = s.fluxMax().value111 snr0 = s.computeSN()112 s.normalize()113 assert_allclose(s.fluxMax().value,1.)114 assert_allclose(snr0,s.computeSN())115 assert s.fscale == 'Normalized'116 s.scale(2.0)117 assert_allclose(s.fluxMax().value,2.)118 assert_allclose(snr0,s.computeSN())119 assert s.fscale == 'Scaled'120 s.fluxCalibrate('2MASS J',15.0)121 assert s.fscale == 'Apparent'122 s.fluxCalibrate('2MASS J',15.0,apparent=True)123 assert s.fscale == 'Apparent'124 s.fluxCalibrate('2MASS J',15.0,absolute=True)125 assert s.fscale == 'Absolute'126 mag,mag_e = splat.filterMag(s,'2MASS J')127 assert_allclose(mag,15.0)128 s.reset()129 assert_allclose(s.fluxMax().value,omx)130 assert_allclose(snr0,s.computeSN())131 132def test_spectrum_conversions():133# toFnu134# toFlam135# surface136# brightnessTemperature137# temperature138 s = splat.Spectrum(10001)139 bunit = s.flux.unit140 omx = s.fluxMax()141 assert s.flux.unit.is_equivalent(u.watt/u.m**3)142 s.flamToFnu()143 assert s.flux.unit.is_equivalent(u.Jy)144 s.fnuToFlam()145 assert s.flux.unit.is_equivalent(u.watt/u.m**3)146 s.fluxCalibrate('2MASS J',15.0,absolute=True)147 assert s.fscale == 'Absolute'148 mx = s.fluxMax()149 s.surface(0.1)150 assert s.fscale == 'Surface'151 assert_allclose(s.fluxMax()/mx,((100.*u.pc/const.R_sun)**2).to(u.m/u.m))152 s.brightnessTemperature()153 assert s.fscale == 'Temperature'154 assert s.funit == u.K155 s.reset()156 assert s.flux.unit == bunit157 assert s.fluxMax() == omx158 159def test_spectrum_plot():160# plot161 file = splat.TMPFILENAME+'.png'162 s = splat.Spectrum(10001)163 s.plot(file=file)164 assert os.access(file,os.R_OK)165 os.remove(file)166def test_spectrum_smooth():167# smooth168# _smoothToResolution169# _smoothToSlitPixelWidth170# _smoothToSlitWidth171 s = splat.Spectrum(10001)172 res0 = copy.deepcopy(s.resolution)173 slit0 = copy.deepcopy(s.slitwidth)174 slitp0 = copy.deepcopy(s.slitpixelwidth)175 assert slit0.unit == u.arcsec176 s.smooth(resolution = 50)177 assert_allclose(s.resolution,50)178 assert_allclose(s.slitwidth,slit0*res0/50)179 assert_allclose(s.slitpixelwidth,slitp0*res0/50)180 s.reset()181 s.smooth(slitwidth = 3*u.arcsec)182 assert_allclose(s.slitwidth,3.*u.arcsec)183 assert_allclose(s.resolution,res0*(slit0/s.slitwidth).value)184 assert_allclose(s.slitpixelwidth,slitp0*(s.slitwidth/slit0).value)185 s.reset()186 s.smooth(slitwidth = 3.)187 assert_allclose(s.slitwidth,3.*u.arcsec)188 assert_allclose(s.resolution,res0*(slit0/s.slitwidth).value)189 assert_allclose(s.slitpixelwidth,slitp0*(s.slitwidth/slit0).value)190 s.reset()191 s.smooth(slitpixelwidth = 5)192 assert_allclose(s.slitpixelwidth,5)193 assert_allclose(s.resolution,res0*slitp0/s.slitpixelwidth)194 assert_allclose(s.slitwidth,slit0*s.slitpixelwidth/slitp0)195 s.reset()196 assert_allclose(s.slitpixelwidth,slitp0)197 assert_allclose(s.resolution,res0)198 assert_allclose(s.slitwidth,slit0)199 200def test_classify_gravity():201# classifyByTemplate202# classifyGravity203 sp = splat.Spectrum(10001) 204 grav = splat.classifyGravity(sp)205 assert grav == 'FLD-G'206 grav = splat.classifyGravity(sp,allscores=True)207 assert isinstance(grav,dict)208 assert grav['gravity_class'] == 'FLD-G'209 #assert grav['spt'] == 'L4.0'210 grav = splat.classifyGravity(sp,allscores=True,spt='L5')211 assert grav['gravity_class'] == 'FLD-G'212 assert grav['spt'] == 'L5.0'213 sp = splat.getSpectrum(name='G 196-3B')[0]214 grav = splat.classifyGravity(sp,allscores=True)215 assert grav['gravity_class'] == 'VL-G'216 assert grav['spt'] == 'L3.0'217 assert grav['score'] >= 2.218def test_compare():219# compareSpectra220 from .. import model as spm221 sp = splat.Spectrum(10001)222 mdl = spm.getModel(teff=2000,logg=5.0)223 chi, scale = splat.compareSpectra(sp,mdl,mask_standard=True,stat='chisqr')224# sys.stderr.write('\nScaling model: chi^2 = {}, scale = {}'.format(chi,scale))225# sys.stderr.write('\n...compareSpectra successful\n'.format(chi,scale))226 227 228def test_indices():229# measureIndex230# measureIndexSet231# classifyByIndex232 sp = splat.Spectrum(10001)233 ind = splat.measureIndexSet(sp,set='burgasser')234 assert 'CH4-H' in list(ind.keys())235 assert_allclose(ind['CH4-H'][0],1.04,rtol=ind['CH4-H'][1])236 for st in list(splat.INDICES_SETS.keys()):237 ind = splat.measureIndexSet(sp,set=st)238 assert len(ind) > 0239 240 spt, spt_e = splat.classifyByIndex(sp,set='burgasser',string=False)241 assert_allclose(spt,26.0,rtol=spt_e)242 spt, spt_e = splat.classifyByIndex(sp,set='reid',string=False)243 assert_allclose(spt,24.6,rtol=spt_e)244 spt, spt_e = splat.classifyByIndex(sp,set='allers',string=False)245 assert_allclose(spt,24.5,rtol=spt_e)246 247def test_standards():248# initiateStandards249# getStandard250# classifyByStandard251 std = splat.getStandard('M1.0')252 assert 'M1.0' in list(splat.STDS_DWARF_SPEX.keys())253 assert std.name == 'Gl424'254 assert std.spex_type == 'M1.0'255 std = splat.getStandard('esdM5.0')256 assert 'esdM5.0' in list(splat.STDS_ESD_SPEX.keys())257 assert std.name == 'LP 589-7'258 assert std.opt_type == 'esdM5'259 std = splat.getStandard(16,sd=True)260 assert 'sdM6.0' in list(splat.STDS_SD_SPEX.keys())261 assert std.name == 'LHS 1074'262 assert std.opt_type == 'sdM6'263 splat.initiateStandards()264 for typ in list(splat.STDS_DWARF_SPEX_KEYS.keys()):265 assert type(splat.STDS_DWARF_SPEX[typ]) == splat.Spectrum266 splat.initiateStandards(sd=True)267 for typ in list(splat.STDS_SD_SPEX_KEYS.keys()):268 assert type(splat.STDS_SD_SPEX[typ]) == splat.Spectrum269 splat.initiateStandards(esd=True)270 for typ in list(splat.STDS_ESD_SPEX_KEYS.keys()):271 assert type(splat.STDS_ESD_SPEX[typ]) == splat.Spectrum272 sp = splat.Spectrum(10001)273 spt, spt_e = splat.classifyByStandard(sp,method='kirkpatrick',verbose=True)274 assert spt == 'L5.0'275 spt, spt_e = splat.classifyByStandard(sp,method='kirkpatrick',string=False)276 assert spt == 25.0277 spt, spt_e = splat.classifyByStandard(sp,sptrange=['M1.0','M8.0'],verbose=True)278 assert spt == 'M8.0'279 spt, spt_e = splat.classifyByStandard(sp,sd=True)280 assert spt == 'sdL0.0'281 spt, spt_e = splat.classifyByStandard(sp,esd=True)282 assert spt == 'esdM5.0'283 file = splat.TMPFILENAME+'.png'284 spt, spt_e = splat.classifyByStandard(sp,method='kirkpatrick',plot=True,file=file)285 assert os.access(file,os.R_OK)286 os.remove(file)287 288def test_getspectrum():289# getSpecturm290# get random spectrum291 sp = splat.getSpectrum(lucky=True,published=True)292 assert type(sp) == list293 assert type(sp[0]) == splat.Spectrum294 print(type(sp[0]))295# get spectrum by shortname296 sp = splat.getSpectrum(shortname='0559-1404')297 assert sp[0].shortname == 'J0559-1404'298# get spectrum by source key299 sp = splat.getSpectrum(source_key=10001) 300 assert int(sp[0].source_key) == 10001301 assert sp[0].shortname == 'J0000+2554'302# get spectrum by data key303 sp = splat.getSpectrum(data_key=10001)304 assert int(sp[0].data_key) == 10001305 assert sp[0].shortname == 'J0539-0059'306# get spectrum in a range of subtypes307 sp = splat.getSpectrum(spt=['L5','T5'],spt_type='spex',lucky=True)[0]308 n = splat.typeToNum(sp.spex_type)309 assert (n>=25 and n<=35)310# make sure getSpectrum fails properly311 sp = splat.getSpectrum(shortname='9999')312 assert len(sp) == 0313# incomplete tests314def test_database():315# fetchDatabase316# keySource317# keySpectrum318# searchLibrary319 s = splat.searchLibrary(published=True)320 assert len(s) > 1500321 s = splat.searchLibrary(young=True,output='DATA_FILE')322 assert '.fits' in s[0]323def test_masking():324# _generateMask325 pass326def test_classify_template():327# classifyByTemplate328 pass329def test_ews():330# measureEW331# measureEWSet332 pass333def test_metallicity():334# metallicity...
test_utilities.py
Source:test_utilities.py
1# -*- coding: utf-8 -*-2from __future__ import print_function3# this is the test function set for splat utility functions4# imports - internal5import copy6# # imports - external7import numpy8from astropy import units as u # standard units9from astropy import constants as const # physical constants in SI units10from astropy import coordinates as coord # coordinate conversion11from astropy.io import fits12from numpy.testing.utils import assert_allclose13# splat functions and constants14from ..initialize import *15from ..utilities import *16from .. import core as splat17#import splat as splat18# things to test19# isNumber 20#####################21# TESTING FUNCTIONS #22#####################23def test_online_access():24# checkFile25# checkAccess26# checkLocal27# checkOnline28# checkOnlineFile29 assert splat.checkOnline()30 assert splat.checkOnlineFile()31 assert len(splat.checkOnlineFile('Reference/SpectralModels/'))>032 assert len(splat.checkOnlineFile('Reference/Spectra/11221_10235.fits'))>033 assert len(splat.checkOnlineFile('Reference/Spectra/11220_10166.fits'))>034 assert len(splat.checkLocal('Reference/SpectralModels/'))>035 assert len(splat.checkLocal('Reference/Spectra/11221_10235.fits'))>036 assert len(splat.checkLocal('Reference/Spectra/11220_10166.fits'))==037 assert splat.checkFile('11221_10235.fits')38 assert splat.checkFile('11220_10166.fits')39 assert splat.checkAccess()40def test_isnumber():41# checkKeys42 assert splat.isNumber(3)43 assert splat.isNumber(3.0)44 assert splat.isNumber(3.0*u.arcsec)45 assert splat.isNumber('3')46 assert not splat.isNumber('hello')47 assert not splat.isNumber(numpy.nan)48 assert not splat.isNumber(True)49def test_coordinate_conversion():50# coordinateToDesignation 51# designationToCoordinate 52# designationToShortName 53# properCoordinates 54 d = 'J05591914-1404488'55 assert splat.designationToShortName(d) == 'J0559-1404'56 c = splat.designationToCoordinate(d)57 assert isinstance(c,coord.sky_coordinate.SkyCoord)58 assert_allclose(c.ra.value,89.82975,rtol=1.e-5)59 assert_allclose(c.dec.value,-14.08002,rtol=1.e-5)60 c1 = splat.properCoordinates(d)61 assert isinstance(c1,coord.sky_coordinate.SkyCoord)62 assert_allclose(c1.ra.value,c.ra.value,rtol=1.e-5)63 assert_allclose(c1.dec.value,c.dec.value,rtol=1.e-5)64 d1 = splat.coordinateToDesignation(c)65 assert splat.designationToShortName(d1) == 'J0559-1404'66 c2 = splat.designationToCoordinate(d1)67 assert isinstance(c2,coord.sky_coordinate.SkyCoord)68 assert_allclose(c2.ra.value,c.ra.value,rtol=1.e-5)69 assert_allclose(c2.dec.value,c.dec.value,rtol=1.e-5) 70 c3 = splat.properCoordinates('05 59 19.14 -14 04 48.8') 71 assert_allclose(c3.ra.value,c.ra.value,rtol=1.e-4)72 assert_allclose(c3.dec.value,c.dec.value,rtol=1.e-4) 73 c4 = splat.properCoordinates('05:59:19.14 -14:04:48.8') 74 assert_allclose(c4.ra.value,c.ra.value,rtol=1.e-4)75 assert_allclose(c4.dec.value,c.dec.value,rtol=1.e-4) 76 c5 = splat.properCoordinates('05h59m19.14s -14d04m48.8s') 77 assert_allclose(c5.ra.value,c.ra.value,rtol=1.e-4)78 assert_allclose(c5.dec.value,c.dec.value,rtol=1.e-4) 79 c6 = splat.properCoordinates([89.82975,-14.08002]) 80 assert_allclose(c6.ra.value,c.ra.value,rtol=1.e-4)81 assert_allclose(c6.dec.value,c.dec.value,rtol=1.e-4) 82def test_type_conversion():83# typeToNum 84 assert splat.typeToNum('L5') == 25.85 assert splat.typeToNum(25.0) == 'L5.0'86 splat.typeToNum(25.,subclass='sd') == 'sdL5.0'87 assert splat.typeToNum('K0') == 0.88 assert splat.typeToNum('m0') == 10.89 assert splat.typeToNum('L0') == 20.90 assert splat.typeToNum('t0') == 30.91 assert splat.typeToNum('Y0') == 40.92# assert splat.typeToNum('A0') == numpy.nan93 assert splat.typeToNum(25.,error=':') == 'L5.0:'94 assert splat.typeToNum(25.,uncertainty=1.2) == 'L5.0:'95 assert splat.typeToNum(25.,lumclass='I') == 'L5.0 I'96 assert splat.typeToNum(25.,peculiar=True) == 'L5.0p'97 assert splat.typeToNum(25.,ageclass='beta',uncertainty=2.5) == 'L5.0beta::'98 t = splat.typeToNum([12,18,26])99 assert isinstance(t,list)100 assert 'M8.0' in t101def test_date_conversion():102# properdate103 assert splat.properDate('20050523') == '2005-05-23'104 assert splat.properDate(20050523) == '2005-05-23'105 assert splat.properDate('050523') == '2005-05-23'106 assert splat.properDate(990523) == '1999-05-23'107 assert splat.properDate('5/23/2005') == '2005-05-23'108 assert splat.properDate('5/23/05') == '2005-05-23'109 assert splat.properDate('5/23/85') == '1985-05-23'110 assert splat.properDate('23 May 2005') == '2005-05-23'111 assert splat.properDate('2005 May 23') == '2005-05-23'112 assert splat.properDate('20050523',output='YYYYMMDD') == '20050523'113 assert splat.properDate('20050523',output='YYMMDD') == '050523'114 assert splat.properDate('20050523',output='MM/DD/YY') == '05/23/05'115 assert splat.properDate('20050523',output='MM/DD/YYYY') == '05/23/2005'116 assert splat.properDate('20050523',output='YYYY/MM/DD') == '2005/05/23'117 assert splat.properDate('20050523',output='DD/MM/YYYY') == '23/05/2005'118 assert splat.properDate('20050523',output='DD MMM YYYY') == '23 May 2005'119 assert splat.properDate('20050523',output='YYYY MMM DD') == '2005 May 23'120def test_stats():121# distributionStats 122# weightedMeanVar 123 values = [0.3,0.5,2.4,6.1,5.6,3.2,1.8,5.0,2.2,-4.5,10.2,-0.5,numpy.nan]124 weights = [1,1,2,3,3,2,2,3,2,0,4,0,0]125 x = splat.distributionStats(values)126 assert isinstance(x,numpy.ndarray)127 assert_allclose(x[1],numpy.nanmedian(values))128 x1 = splat.distributionStats(values,sigma=1.5)129 assert x[0] >= x1[0]130 assert x[-1] <= x1[-1]131 assert x[1] == x1[1]132 x2 = splat.distributionStats(values,q=[0.25,0.5,0.75])133 assert x[0] <= x2[0]134 assert x[-1] >= x2[-1]135 assert x[1] == x2[1]136 x3 = splat.distributionStats(values,weights=weights)137 assert x[0] <= x3[0]138 assert x[-1] <= x3[-1]139 assert x[1] <= x3[1]140 weights0 = numpy.ones(len(weights))141 x = splat.weightedMeanVar(values,weights0)142 assert isinstance(x,tuple)143 x2 = splat.weightedMeanVar(values,weights)144 assert x2[0] > x[0]145 assert x2[-1] < x[-1]146 147# incomplete tests148def test_check_keys():149# checkKeys...
EffectManager.py
Source:EffectManager.py
1from pandac.PandaModules import *2from pandac.PandaModules import *3from direct.showbase.DirectObject import DirectObject4from direct.interval.IntervalGlobal import *5from toontown.battle.BattleProps import *6from toontown.battle import MovieUtil7class EffectManager(DirectObject):8 def __init__(self):9 self.effectList = []10 def delete(self):11 for effect in effectList:12 self.__removeEffect(effect)13 def addSplatEffect(self, spawner, splatName = 'splat-creampie', time = 1, size = 6, parent = render):14 splat = globalPropPool.getProp(splatName)15 splatSeq = Sequence()16 splatType = globalPropPool.getPropType(splatName)17 splatShow = Func(self.__showProp, splat, size, parent, spawner.getPos(parent))18 splatAnim = ActorInterval(splat, splatName)19 splatHide = Func(MovieUtil.removeProp, splat)20 splatRemove = Func(self.__removeEffect, splatSeq)21 splatSeq.append(splatShow)22 splatSeq.append(splatAnim)23 splatSeq.append(splatHide)24 splatSeq.append(splatRemove)25 splatSeq.start()26 self.effectList.append(splatSeq)27 def __showProp(self, prop, size, parent, pos):28 prop.reparentTo(parent)29 prop.setScale(size)30 prop.setBillboardPointEye()31 prop.setPos(pos + Vec3(0, 0, size / 2))32 def __removeEffect(self, effect):33 if effect.isPlaying():34 effect.finish()35 self.effectList.remove(effect)36 effect = None...
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