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How to use _setup_parser method in avocado
Best Python code snippet using avocado_python
toml_v1_parser_test.py
Source:toml_v1_parser_test.py 
...24 data_builder = get_data_builder(SANSFacility.ISIS, file_information)25 data_builder.set_sample_scatter("SANS2D00022024")26 data_builder.set_sample_scatter_period(3)27 return data_builder.build()28 def _setup_parser(self, dict_vals) -> TomlV1Parser:29 def _add_missing_mandatory_key(dict_to_check: Dict, key_path: List[str], replacement_val):30 _dict = dict_to_check31 for key in key_path[0:-1]:32 if key not in _dict:33 _dict[key] = {}34 _dict = _dict[key]35 if key_path[-1] not in _dict:36 _dict[key_path[-1]] = replacement_val # Add in child value37 return dict_to_check38 self._mocked_data_info = self._get_mock_data_info()39 # instrument key needs to generally be present40 dict_vals = _add_missing_mandatory_key(dict_vals, ["instrument", "name"], "LOQ")41 dict_vals = _add_missing_mandatory_key(dict_vals, ["detector", "configuration", "selected_detector"], "rear")42 return TomlV1Parser(dict_vals, file_information=None)43 def test_instrument(self):44 parser = self._setup_parser(dict_vals={"instrument": {"name": SANSInstrument.SANS2D.value}})45 inst = parser._implementation.instrument46 self.assertTrue(inst is SANSInstrument.SANS2D, msg="Got %r instead" % inst)47 def test_validate_is_called_on_init(self):48 schema_validator = mock.Mock()49 # No implementation needed50 with mock.patch("sans.user_file.toml_parsers.toml_v1_parser.TomlV1Parser._get_impl"):51 TomlV1Parser(dict_to_parse=None, schema_validator=schema_validator, file_information=None)52 self.assertTrue(schema_validator.validate.called)53 def _loop_over_supported_keys(self, supported_keys, top_level_keys):54 top_level_dict = {}55 dict_view = top_level_dict56 # We need to append a mock object using the bottom key in the below loop57 for key in top_level_keys[:-1]:58 dict_view[key] = {}59 dict_view = dict_view[key]60 for k, func in supported_keys:61 expected = mock.NonCallableMock()62 dict_view[top_level_keys[-1]] = {k: expected}63 parser = self._setup_parser(top_level_dict)64 val = func(parser)65 self.assertEqual(expected, val, "Failed to get key {0}".format(k))66 def test_instrument_configuration_parsed(self):67 supported_keys = [68 ("collimation_length", lambda x: x.get_state_convert_to_q().q_resolution_collimation_length),69 ("gravity_extra_length", lambda x: x.get_state_convert_to_q().gravity_extra_length),70 ("sample_aperture_diameter", lambda x: x.get_state_convert_to_q().q_resolution_a2),71 ("sample_offset", lambda x: x.get_state_move(None).sample_offset),72 ("gravity_enabled", lambda x: x.get_state_convert_to_q().use_gravity)73 ]74 self._loop_over_supported_keys(supported_keys=supported_keys, top_level_keys=["instrument", "configuration"])75 def test_detector_configuration_parsed(self):76 supported_keys = [77 ("rear_scale", lambda x: x.get_state_scale(file_information=None).scale),78 # ("front_scale", lambda x: x.get_state_scale()) TODO this is issue # 2794879 ]80 self._loop_over_supported_keys(supported_keys=supported_keys, top_level_keys=["detector", "configuration"])81 top_level_dict = {"detector": {"configuration": {}}}82 config_dict = top_level_dict["detector"]["configuration"]83 expected_reduction_mode = ReductionMode.ALL84 config_dict["selected_detector"] = expected_reduction_mode.value85 config_dict["front_centre"] = {"x": 1, "y": 2}86 config_dict["rear_centre"] = {"x": 2, "y": 3}87 def get_beam_position(state_move, bank_enum):88 x = state_move.detectors[bank_enum.value].sample_centre_pos189 y = state_move.detectors[bank_enum.value].sample_centre_pos290 return x, y91 parser = self._setup_parser(dict_vals=top_level_dict)92 state_move = parser.get_state_move(None)93 self.assertTrue(parser.get_state_reduction_mode().reduction_mode is expected_reduction_mode)94 self.assertEqual((1, 2), get_beam_position(state_move, DetectorType.HAB))95 self.assertEqual((2, 3), get_beam_position(state_move, DetectorType.LAB))96 def test_all_centre_entry(self):97 input_dict = {"detector": {"configuration": {"all_centre": {"x": 2, "y": 3.4}}}}98 parser = self._setup_parser(input_dict)99 for i in [ReductionMode.HAB, ReductionMode.LAB]:100 move = parser.get_state_move(None)101 self.assertEqual(2, move.detectors[i.value].sample_centre_pos1)102 self.assertEqual(3.4, move.detectors[i.value].sample_centre_pos2)103 def test_throws_when_all_and_rear_specified(self):104 input_dict = {"detector": {"configuration": {"all_centre": {"x": 2, "y": 3.4},105 "rear_centre": {"x": 2}}}}106 with self.assertRaisesRegex(ValueError, "front_centre"):107 self._setup_parser(input_dict)108 def test_throws_when_all_and_front_specified(self):109 input_dict = {"detector": {"configuration": {"all_centre": {"x": 2, "y": 3.4},110 "front_centre": {"x": 2}}}}111 with self.assertRaisesRegex(ValueError, "front_centre"):112 self._setup_parser(input_dict)113 def test_rear_front_maps_to_enum_correctly(self):114 for user_input, enum_val in [("rear", ReductionMode.LAB), ("front", ReductionMode.HAB),115 ("all", ReductionMode.ALL), ("merged", ReductionMode.MERGED)]:116 input_dict = {"detector": {"configuration": {"selected_detector": user_input}}}117 parser = self._setup_parser(dict_vals=input_dict)118 self.assertEqual(enum_val, parser.get_state_reduction_mode().reduction_mode)119 def test_legacy_reduction_mode_rejected(self):120 for legacy_input in ["hab", "lab"]:121 with self.assertRaisesRegex(ValueError, "rear"):122 input_dict = {"detector": {"configuration": {"selected_detector": legacy_input}}}123 self._setup_parser(dict_vals=input_dict)124 def test_reduction_mode_mandatory(self):125 with self.assertRaisesRegex(MissingMandatoryParam, "selected_detector"):126 TomlV1Parser({"instrument": {"name": "LOQ"}}, None)127 def test_binning_commands_parsed(self):128 # Wavelength129 for bin_type in ["Lin", "Log"]:130 wavelength_dict = {"binning": {"wavelength": {"start": 1.1, "step": 0.1, "stop": 2.2, "type": bin_type}}}131 wavelength = self._setup_parser(wavelength_dict).get_state_wavelength()132 self.assertEqual((1.1, 2.2), wavelength.wavelength_interval.wavelength_full_range)133 self.assertEqual(0.1, wavelength.wavelength_interval.wavelength_step)134 self.assertEqual(RangeStepType(bin_type), wavelength.wavelength_step_type)135 one_d_reduction_q_dict = {"binning": {"1d_reduction": {"binning": "1.0, 0.1, 2.0, -0.2, 3.0",136 "radius_cut": 12.3,137 "wavelength_cut": 23.4}}}138 one_d_convert_to_q = self._setup_parser(one_d_reduction_q_dict).get_state_convert_to_q()139 self.assertEqual(1.0, one_d_convert_to_q.q_min)140 self.assertEqual(3.0, one_d_convert_to_q.q_max)141 self.assertEqual("1.0, 0.1, 2.0, -0.2, 3.0", one_d_convert_to_q.q_1d_rebin_string.strip())142 self.assertEqual(12.3, one_d_convert_to_q.radius_cutoff)143 self.assertEqual(23.4, one_d_convert_to_q.wavelength_cutoff)144 two_d_reduction_q_dict = {"binning": {"2d_reduction": {"step": 1.0, "stop": 5.0, "type": "Lin"}}}145 results = self._setup_parser(two_d_reduction_q_dict)146 two_d_convert_to_q = results.get_state_convert_to_q()147 self.assertEqual(5.0, two_d_convert_to_q.q_xy_max)148 self.assertEqual(1.0, two_d_convert_to_q.q_xy_step)149 self.assertTrue(two_d_convert_to_q.q_xy_step_type is RangeStepType.LIN)150 self.assertTrue(results.get_state_calculate_transmission().rebin_type is RebinType.REBIN)151 def test_reduction_commands_parsed(self):152 top_level_dict = {"reduction": {"merged": {},153 "events": {}}}154 merged_dict = top_level_dict["reduction"]["merged"]155 merged_dict["merge_range"] = {"min": 1, "max": 2, "use_fit": False}156 merged_dict["rescale"] = {"min": 0.1, "max": 0.2, "use_fit": True}157 merged_dict["shift"] = {"min": 0.3, "max": 0.4, "use_fit": True}158 events_dict = top_level_dict["reduction"]["events"]159 expected_binning = "1,1,10"160 events_dict["binning"] = expected_binning161 parsed_obj = self._setup_parser(top_level_dict)162 self.assertEqual(parsed_obj.get_state_compatibility().time_rebin_string, expected_binning)163 state_reduction = parsed_obj.get_state_reduction_mode()164 self.assertEqual(state_reduction.merge_min, 1)165 self.assertEqual(state_reduction.merge_max, 2)166 self.assertEqual(state_reduction.merge_mask, False)167 # Note this should take the max and min of rescale and shift when both are present168 self.assertEqual(state_reduction.merge_range_min, 0.1)169 self.assertEqual(state_reduction.merge_range_max, 0.4)170 self.assertEqual(state_reduction.merge_fit_mode, FitModeForMerge.BOTH)171 def test_detector_parsed(self):172 top_level_dict = {"detector": {"correction": {"direct": {},173 "flat": {},174 "tube": {},175 "position": {}},176 "radius_limit": {"min": None,177 "max": None}}}178 correction_dict = top_level_dict["detector"]["correction"]179 direct_front = mock.NonCallableMock()180 direct_rear = mock.NonCallableMock()181 correction_dict["direct"]["front_file"] = direct_front182 correction_dict["direct"]["rear_file"] = direct_rear183 flat_front = mock.NonCallableMock()184 flat_rear = mock.NonCallableMock()185 correction_dict["flat"]["front_file"] = flat_front186 correction_dict["flat"]["rear_file"] = flat_rear187 tube_file = mock.NonCallableMock()188 correction_dict["tube"]["file"] = tube_file189 radius_limit = top_level_dict["detector"]["radius_limit"]190 radius_limit["min"] = 100191 radius_limit["max"] = 200192 parser = self._setup_parser(top_level_dict)193 wavelength_state = parser.get_state_wavelength_and_pixel_adjustment()194 # Where Front = HAB and Rear = LAB in SANS terminology195 self.assertEqual(wavelength_state.adjustment_files[DetectorType.LAB.value].wavelength_adjustment_file,196 direct_rear)197 self.assertEqual(wavelength_state.adjustment_files[DetectorType.HAB.value].wavelength_adjustment_file,198 direct_front)199 self.assertEqual(wavelength_state.adjustment_files[DetectorType.LAB.value].pixel_adjustment_file,200 flat_rear)201 self.assertEqual(wavelength_state.adjustment_files[DetectorType.HAB.value].pixel_adjustment_file,202 flat_front)203 self.assertEqual(parser.get_state_adjustment(None).calibration, tube_file)204 mask = parser.get_state_mask(None)205 self.assertIsInstance(mask, StateMask)206 self.assertEqual(100, mask.radius_min)207 self.assertEqual(200, mask.radius_max)208 def test_detector_correction_position(self):209 top_level_dict = {"detector": {"correction": {"position": {}}}}210 position_dict = top_level_dict["detector"]["correction"]["position"]211 for adjustment in ["_x", "_y", "_z", "_rot", "_radius", "_side", "_x_tilt", "_y_tilt", "_z_tilt"]:212 position_dict["front" + adjustment] = mock.NonCallableMock()213 position_dict["rear" + adjustment] = mock.NonCallableMock()214 def assert_lab_hab_val(move_state, adjustment_name, state_name):215 lab_val = getattr(move_state.detectors[DetectorType.LAB.value], state_name)216 hab_val = getattr(move_state.detectors[DetectorType.HAB.value], state_name)217 self.assertEqual(position_dict["front" + adjustment_name], hab_val)218 self.assertEqual(position_dict["rear" + adjustment_name], lab_val)219 state_move = self._setup_parser(top_level_dict).get_state_move(None)220 assert_lab_hab_val(state_move, "_x", "x_translation_correction")221 assert_lab_hab_val(state_move, "_y", "y_translation_correction")222 def test_q_resolution(self):223 top_level_dict = {"q_resolution": {}}224 q_resolution_dict = top_level_dict["q_resolution"]225 q_resolution_dict["enabled"] = True226 q_resolution_dict["moderator_file"] = mock.NonCallableMock()227 q_resolution_dict["source_aperture"] = 1228 q_resolution_dict["delta_r"] = 2229 q_resolution_dict["h1"], q_resolution_dict["h2"] = 3, 4230 q_resolution_dict["w1"], q_resolution_dict["w2"] = 5, 6231 q_resolution = self._setup_parser(top_level_dict).get_state_convert_to_q()232 self.assertEqual(True, q_resolution.use_q_resolution)233 self.assertEqual(1, q_resolution.q_resolution_a1)234 self.assertEqual(2, q_resolution.q_resolution_delta_r)235 self.assertEqual(3, q_resolution.q_resolution_h1)236 self.assertEqual(4, q_resolution.q_resolution_h2)237 self.assertEqual(5, q_resolution.q_resolution_w1)238 self.assertEqual(6, q_resolution.q_resolution_w2)239 self.assertEqual(q_resolution_dict["moderator_file"], q_resolution.moderator_file)240 def test_transmission(self):241 top_level_dict = {242 "instrument": {"configuration": {"norm_monitor": "", "trans_monitor": ""}},243 "normalisation": {"monitor": {"M3": {}, "M5": {}}},244 "transmission": {"monitor": {"M3": {}, "M5": {}}}245 }246 monitor_dict = top_level_dict["transmission"]["monitor"]247 m3_dict = monitor_dict["M3"]248 m3_dict["background"] = [100, 200]249 m3_dict["spectrum_number"] = 3250 m3_dict["shift"] = 10251 m3_dict["use_own_background"] = True252 top_level_dict["normalisation"]["monitor"]["M3"]["spectrum_number"] = 100253 m5_dict = monitor_dict["M5"]254 m5_dict["spectrum_number"] = 5255 m5_dict["use_own_background"] = False256 m5_dict["shift"] = -10257 top_level_dict["normalisation"]["monitor"]["M5"]["spectrum_number"] = 200258 top_level_dict["instrument"]["configuration"]["norm_monitor"] = "M3"259 top_level_dict["instrument"]["configuration"]["trans_monitor"] = "M3"260 parser = self._setup_parser(top_level_dict)261 calc_transmission = parser.get_state_calculate_transmission()262 self.assertEqual(100, calc_transmission.incident_monitor)263 self.assertEqual(3, calc_transmission.transmission_monitor)264 self.assertEqual(10, parser.get_state_move(None).monitor_4_offset)265 self.assertEqual({'3': 100}, calc_transmission.background_TOF_monitor_start)266 self.assertEqual({'3': 200}, calc_transmission.background_TOF_monitor_stop)267 # Check switching the selected monitor picks up correctly268 top_level_dict["instrument"]["configuration"]["norm_monitor"] = "M5"269 top_level_dict["instrument"]["configuration"]["trans_monitor"] = "M5"270 parser = self._setup_parser(top_level_dict)271 calc_transmission = parser.get_state_calculate_transmission()272 self.assertEqual(200, calc_transmission.incident_monitor)273 self.assertEqual(5, calc_transmission.transmission_monitor)274 self.assertEqual(-10, parser.get_state_move(None).monitor_5_offset)275 self.assertFalse(calc_transmission.background_TOF_monitor_start)276 self.assertFalse(calc_transmission.background_TOF_monitor_stop)277 with self.assertRaises(KeyError):278 top_level_dict["instrument"]["configuration"]["trans_monitor"] = "M999"279 self._setup_parser(top_level_dict)280 def test_transmission_with_different_norm_monitor(self):281 # A transmission run can be normalised by a different norm monitor. This is useful for cryostats282 # where a different transmission monitor is used due to physical space limitations on the instrument283 top_level_dict = {284 "instrument": {"configuration": {"norm_monitor": "M3", "trans_monitor": "M3"}},285 "normalisation": {"monitor": {"M3": {}, "M5": {}}},286 "transmission": {"monitor": {"M3": {}}}287 }288 monitor_dict = top_level_dict["transmission"]["monitor"]289 top_level_dict["normalisation"]["monitor"]["M3"]["spectrum_number"] = 3290 top_level_dict["normalisation"]["monitor"]["M5"]["spectrum_number"] = 5291 m3_dict = monitor_dict["M3"]292 m3_dict["spectrum_number"] = 3293 m3_dict["use_different_norm_monitor"] = True294 with self.assertRaises(KeyError):295 self._setup_parser(top_level_dict)296 m3_dict["trans_norm_monitor"] = "M5"297 parser = self._setup_parser(top_level_dict)298 calc_transmission = parser.get_state_calculate_transmission()299 self.assertEqual(5, calc_transmission.incident_monitor)300 self.assertEqual(3, calc_transmission.transmission_monitor)301 def test_transmission_monitor_parser_ignores_roi(self):302 top_level_dict = {303 "instrument": {"configuration": {"trans_monitor": "ROI"}},304 "transmission": {"monitor": {"M3": {}},305 "ROI": {"file": "foo"}}306 }307 monitor_dict = top_level_dict["transmission"]["monitor"]308 m3_dict = monitor_dict["M3"]309 m3_dict["spectrum_number"] = 3310 parser = self._setup_parser(top_level_dict)311 calc_transmission = parser.get_state_calculate_transmission()312 self.assertEqual(3, calc_transmission.transmission_monitor)313 def test_transmission_monitor_parses_roi(self):314 expected_file_name = "test.xml"315 top_level_dict = {316 "instrument": {"configuration": {"trans_monitor": "ROI"}},317 "transmission": {"ROI": {"file": expected_file_name}}318 }319 result = self._setup_parser(top_level_dict)320 self.assertEqual([expected_file_name], result.get_state_calculate_transmission().transmission_roi_files)321 def test_transmission_monitor_errors_for_multiple_values(self):322 top_level_dict = {323 "instrument": {"configuration": {"trans_monitor": "ROI"}},324 "transmission": {"ROI": {"file": ["test1.xml", "test2.xml"]}}325 }326 with self.assertRaisesRegex(ValueError, "single file"):327 self._setup_parser(top_level_dict)328 def test_transmission_monitor_errors_for_empty_value(self):329 top_level_dict = {330 "instrument": {"configuration": {"trans_monitor": "ROI"}},331 "transmission": {"ROI": {"file": ""}}332 }333 with self.assertRaisesRegex(ValueError, "empty"):334 self._setup_parser(top_level_dict)335 def test_transmission_fitting(self):336 top_level_dict = {"transmission": {"fitting": {}}}337 fitting_dict = top_level_dict["transmission"]["fitting"]338 fitting_dict["enabled"] = True339 fitting_dict["function"] = "Polynomial"340 fitting_dict["polynomial_order"] = 5341 fitting_dict["parameters"] = {"lambda_min": 20, "lambda_max": 30}342 def check_can_and_sample(parser, attr_name, expected):343 can = parser.get_state_calculate_transmission().fit[DataType.CAN.value]344 sample = parser.get_state_calculate_transmission().fit[DataType.SAMPLE.value]345 self.assertEqual(expected, getattr(can, attr_name))346 self.assertEqual(expected, getattr(sample, attr_name))347 parser = self._setup_parser(top_level_dict)348 check_can_and_sample(parser, "fit_type", FitType.POLYNOMIAL)349 check_can_and_sample(parser, "polynomial_order", 5)350 check_can_and_sample(parser, "wavelength_low", 20)351 check_can_and_sample(parser, "wavelength_high", 30)352 # Linear / Log should not set the above353 fitting_dict["function"] = "Linear"354 parser = self._setup_parser(top_level_dict)355 check_can_and_sample(parser, "fit_type", FitType.LINEAR)356 check_can_and_sample(parser, "polynomial_order", 0)357 check_can_and_sample(parser, "wavelength_low", 20)358 check_can_and_sample(parser, "wavelength_high", 30)359 fitting_dict["function"] = "NotSet"360 with self.assertRaises(KeyError):361 self._setup_parser(top_level_dict)362 fitting_dict["enabled"] = False363 self.assertIsNotNone(self._setup_parser(top_level_dict))364 def test_normalisation_normalization_both_accepted(self):365 for norm_key in "normalisation", "normalization":366 norm_dict = {367 "instrument": {"configuration": {"norm_monitor": "M1"}},368 norm_key: {"monitor": {"M1": {}, "A2": {}}}369 }370 monitor_dict = norm_dict[norm_key]["monitor"]371 m1_dict = monitor_dict["M1"]372 m1_dict["background"] = [100, 200]373 m1_dict["spectrum_number"] = 1374 calc_transmission = self._setup_parser(norm_dict).get_state_calculate_transmission()375 self.assertEqual({'1': 100}, calc_transmission.background_TOF_monitor_start)376 self.assertEqual({'1': 200}, calc_transmission.background_TOF_monitor_stop)377 def test_parsing_all_monitor_background(self):378 top_level_dict = {"normalisation": {"all_monitors": {"enabled": True,379 "background": [1200, 2400]}}}380 parsed = self._setup_parser(top_level_dict)381 parsed_transmission = parsed.get_state_calculate_transmission()382 self.assertEqual(1200, parsed_transmission.background_TOF_general_start)383 self.assertEqual(2400, parsed_transmission.background_TOF_general_stop)384 parsed_norm_monitors = parsed.get_state_normalize_to_monitor(None)385 self.assertEqual(1200, parsed_norm_monitors.background_TOF_general_start)386 self.assertEqual(2400, parsed_norm_monitors.background_TOF_general_stop)387 def test_parsing_all_monitor_background_ignored_false(self):388 top_level_dict = {"normalisation": {"all_monitors": {"enabled": False,389 "background": [1200, 2400]}}}390 parsed = self._setup_parser(top_level_dict)391 parsed_transmission = parsed.get_state_calculate_transmission()392 self.assertIsNone(parsed_transmission.background_TOF_general_start)393 self.assertIsNone(parsed_transmission.background_TOF_general_stop)394 parsed_norm_monitors = parsed.get_state_normalize_to_monitor(None)395 self.assertIsNone(parsed_norm_monitors.background_TOF_general_start)396 self.assertIsNone(parsed_norm_monitors.background_TOF_general_stop)397 def test_parse_normalisation(self):398 # A2 is intentional to check were not hardcoded to Monitor x (Mx), such that a user could have FooY399 top_level_dict = {400 "instrument": {"configuration": {"norm_monitor": ""}},401 "normalisation": {"monitor": {"M1": {}, "A2": {}}}402 }403 monitor_dict = top_level_dict["normalisation"]["monitor"]404 m1_dict = monitor_dict["M1"]405 m1_dict["background"] = [100, 200]406 m1_dict["spectrum_number"] = 1407 a2_dict = monitor_dict["A2"]408 a2_dict["background"] = [400, 800]409 a2_dict["spectrum_number"] = 2410 top_level_dict["instrument"]["configuration"]["norm_monitor"] = "M1"411 parser = self._setup_parser(top_level_dict)412 norm_to_monitor = parser.get_state_normalize_to_monitor(None)413 self.assertEqual({'1': 100}, norm_to_monitor.background_TOF_monitor_start)414 self.assertEqual({'1': 200}, norm_to_monitor.background_TOF_monitor_stop)415 self.assertEqual(1, norm_to_monitor.incident_monitor)416 top_level_dict["instrument"]["configuration"]["norm_monitor"] = "A2"417 parser = self._setup_parser(top_level_dict)418 norm_to_monitor = parser.get_state_calculate_transmission()419 self.assertEqual({'2': 400}, norm_to_monitor.background_TOF_monitor_start)420 self.assertEqual({'2': 800}, norm_to_monitor.background_TOF_monitor_stop)421 self.assertEqual(2, norm_to_monitor.incident_monitor)422 top_level_dict["instrument"]["configuration"]["norm_monitor"] = "NotThere"423 with self.assertRaises(KeyError):424 self._setup_parser(top_level_dict)425 def test_parse_mask_spatial(self):426 top_level_dict = {"mask": {"spatial": {427 "beamstop_shadow": {},428 "front": {},429 "rear": {},430 "mask_pixels": [],431 }}}432 rear_spatial_dict = top_level_dict["mask"]["spatial"]["rear"]433 rear_spatial_dict["detector_columns"] = [101, 102]434 rear_spatial_dict["detector_rows"] = [201, 202]435 rear_spatial_dict["detector_column_ranges"] = [[0, 10], [20, 30]]436 rear_spatial_dict["detector_row_ranges"] = [[40, 50]]437 front_spatial_dict = top_level_dict["mask"]["spatial"]["front"]438 front_spatial_dict["detector_columns"] = [1, 2]439 front_spatial_dict["detector_rows"] = [2, 3]440 front_spatial_dict["detector_column_ranges"] = [[0, 10]]441 front_spatial_dict["detector_row_ranges"] = [[100, 400]]442 top_level_dict["mask"]["spatial"]["beamstop_shadow"] = {"width": 10, "angle": 180}443 mask_pixels_expected = [1, 2, 4, 17000] # 17000 is in HAB on LOQ444 top_level_dict["mask"]["spatial"]["mask_pixels"] = mask_pixels_expected445 mask_state = self._setup_parser(top_level_dict).get_state_mask(None)446 rear_result = mask_state.detectors[DetectorType.LAB.value]447 self.assertIsInstance(rear_result, StateMaskDetectors)448 self.assertEqual([101, 102], rear_result.single_vertical_strip_mask)449 self.assertEqual([201, 202], rear_result.single_horizontal_strip_mask)450 self.assertEqual([0, 20], rear_result.range_vertical_strip_start)451 self.assertEqual([10, 30], rear_result.range_vertical_strip_stop)452 self.assertEqual([40], rear_result.range_horizontal_strip_start)453 self.assertEqual([50], rear_result.range_horizontal_strip_stop)454 front_result = mask_state.detectors[DetectorType.HAB.value]455 self.assertIsInstance(front_result, StateMaskDetectors)456 self.assertEqual([1, 2], front_result.single_vertical_strip_mask)457 self.assertEqual([2, 3], front_result.single_horizontal_strip_mask)458 self.assertEqual([0], front_result.range_vertical_strip_start)459 self.assertEqual([10], front_result.range_vertical_strip_stop)460 self.assertEqual([100], front_result.range_horizontal_strip_start)461 self.assertEqual([400], front_result.range_horizontal_strip_stop)462 # Pixel masks463 self.assertEqual([1, 2, 4], mask_state.detectors[DetectorType.LAB.value].single_spectra)464 self.assertEqual([17000], mask_state.detectors[DetectorType.HAB.value].single_spectra)465 # Beamstop angle466 self.assertEqual(180, mask_state.beam_stop_arm_angle)467 self.assertEqual(10, mask_state.beam_stop_arm_width)468 def test_beamstop_masking_x_y_positions(self):469 for beamstop_values in [{"width": 0.1, "angle": 0.2},470 {"width": 0.1, "angle": 0.2, "x_pos": 0.3, "y_pos": 0.4}]:471 parser = self._setup_parser({"mask": {"spatial": {"beamstop_shadow": beamstop_values}}})472 masks = parser.get_state_mask(None)473 self.assertEqual(beamstop_values["width"], masks.beam_stop_arm_width)474 self.assertEqual(beamstop_values["angle"], masks.beam_stop_arm_angle)475 self.assertEqual(beamstop_values.get("x_pos", 0.0), masks.beam_stop_arm_pos1)476 self.assertEqual(beamstop_values.get("y_pos", 0.0), masks.beam_stop_arm_pos2)477 def test_parse_mask(self):478 top_level_dict = {"mask": {479 "prompt_peak": {},480 "mask_files": [],481 "time": {"tof": []}482 },483 "phi": {}}484 top_level_dict["mask"]["prompt_peak"] = {"start": 101, "stop": 102}485 mask_files_mock = [mock.NonCallableMock()]486 top_level_dict["mask"]["mask_files"] = mask_files_mock487 time_dict = top_level_dict["mask"]["time"]488 time_dict["tof"].extend([{"start": 100, "stop": 200},489 {"start": 300, "stop": 400}])490 top_level_dict["mask"]["phi"] = {"mirror": False,491 "start": -50, "stop": 50}492 parser_result = self._setup_parser(top_level_dict)493 masks = parser_result.get_state_mask(None)494 self.assertIsInstance(masks, StateMask)495 self.assertEqual(mask_files_mock, masks.mask_files)496 self.assertEqual([100, 300], masks.bin_mask_general_start)497 self.assertEqual([200, 400], masks.bin_mask_general_stop)498 self.assertEqual(False, masks.use_mask_phi_mirror)499 self.assertEqual(-50, masks.phi_min)500 self.assertEqual(50, masks.phi_max)501 # TODO split below into own test502 transmission_state = parser_result.get_state_calculate_transmission()503 self.assertEqual(101, transmission_state.prompt_peak_correction_min)504 self.assertEqual(102, transmission_state.prompt_peak_correction_max)505 self.assertTrue(transmission_state.prompt_peak_correction_enabled)506 norm_state = parser_result.get_state_normalize_to_monitor(None)...
test_cli.py
Source:test_cli.py
...183 c = cli.CLIConfigManager()184 c._reset()185 except:186 pass187 def _setup_parser(self):188 return _parser_from_dict({189 "arguments": [190 {"name": "foo"},191 {"name": "foo2", "default": "bar"}192 ],193 })194 def test_no_partial_def(self):195 c = cli.CLIConfigManager()196 p = self._setup_parser()197 config = vars(p.parse_args('--foo baz'))198 self.assertDictEqual(config, {'foo':'baz', 'foo2': 'bar', 'site': 'local'})199 config = vars(p.parse_args('--foo2 baz'))200 self.assertDictEqual(config, {'foo':None, 'foo2': 'baz','site':'local'})201 def test_partial_def_1(self):202 c = cli.CLIConfigManager()203 c.user_defaults = {'foo': 'XX', 'foo2': 'YY'}204 p = self._setup_parser()205 config = vars(p.parse_args('--foo baz'))206 self.assertDictEqual(config, {'foo':'baz', 'foo2': 'YY','site':'local'})207 c.user_defaults = {'foo': 'XX'}208 p = self._setup_parser()209 config = vars(p.parse_args('--foo baz'))210 self.assertDictEqual(config, {'foo':'baz', 'foo2': 'bar','site':'local'})211 c.user_defaults = {'foo2': 'YY'}212 p = self._setup_parser()213 config = vars(p.parse_args('--foo baz'))214 self.assertDictEqual(config, {'foo':'baz', 'foo2': 'YY','site':'local'})215 def test_partial_def_2(self):216 c = cli.CLIConfigManager()217 c.site_defaults = {'foo': 'XX'}218 p = self._setup_parser()219 config = vars(p.parse_args('--foo baz'))220 self.assertDictEqual(config, {'foo':'baz', 'foo2': 'bar','site':'local'})221 c.site_defaults = {'foo': 'XX', 'foo2': 'YY'}222 p = self._setup_parser()223 config = vars(p.parse_args('--foo2 baz'))224 self.assertDictEqual(config, {'foo':'XX', 'foo2': 'baz','site':'local'})225 c.site_defaults = {'foo': 'XX'}226 p = self._setup_parser()227 config = vars(p.parse_args('--foo2 baz'))228 self.assertDictEqual(config, {'foo':'XX', 'foo2': 'baz','site':'local'})229 c.site_defaults = {'foo2': 'YY'}230 p = self._setup_parser()231 config = vars(p.parse_args('--foo2 baz'))232 self.assertDictEqual(config, {'foo':None, 'foo2': 'baz','site':'local'})233 def test_partial_def_3(self):234 c = cli.CLIConfigManager()235 c.user_defaults = {'foo': 'XX', 'foo2': 'YY'}236 c.site_defaults = {'foo': 'XXQ', 'foo2': 'YYQ'}237 p = self._setup_parser()238 config = vars(p.parse_args('--foo baz'))239 self.assertDictEqual(config, {'foo':'baz', 'foo2': 'YY','site':'local'})240 c.user_defaults = {'foo': 'XX', 'foo2': 'YY'}241 c.site_defaults = {'foo': 'XXQ', 'foo2': 'YYQ'}242 p = self._setup_parser()243 config = vars(p.parse_args('--foo2 baz'))244 self.assertDictEqual(config, {'foo':'XX', 'foo2': 'baz','site':'local'})245 c.user_defaults = {'foo': 'XX'}246 c.site_defaults = {'foo': 'XXQ', 'foo2': 'YYQ'}247 p = self._setup_parser()248 config = vars(p.parse_args('--foo baz'))249 self.assertDictEqual(config, {'foo':'baz', 'foo2': 'YYQ','site':'local'})250 c.user_defaults = {'foo2': 'YY'}251 c.site_defaults = {'foo': 'XXQ', 'foo2': 'YYQ'}252 p = self._setup_parser()253 config = vars(p.parse_args('--foo2 baz'))254 self.assertDictEqual(config, {'foo':'XXQ', 'foo2': 'baz','site':'local'})255class TestParseDummyInput(unittest.TestCase):256 def tearDown(self):257 try:258 temp = cli.CLIConfigManager()259 temp._reset()260 except Exception:261 pass262 def test_parse_dummy_input(self):263 # get dir of currently executing script:264 cwd = os.path.dirname(os.path.realpath(__file__))265 code_root = os.path.dirname(os.path.dirname(cwd))266 cli_obj = cli.MDTFTopLevelArgParser(...
cli.py
Source:cli.py
...48class CLI(BaseCLI, metaclass=CLIMeta):49 def __init__(self, parent=None, argname=None, *args, **kwargs):50 self.parent = parent51 self.argname = argname52 self._setup_parser()53 self._parse_args()54 def _setup_parser(self):55 if self.parent:56 self.parser = self.parent.subparsers.add_parser(self.argname)57 else:58 self.parser = argparse.ArgumentParser()59 for name, arg in self._meta.arguments.items():60 self.parser.add_argument(61 name,62 type=arg.argtype,63 help=arg.help_text,64 )65 def _parse_args(self):66 if self.parent is None:67 self.parser.parse_args(namespace=self)68 else:69 for argname, _ in self._meta.arguments.items():70 # print(argname)71 argument = getattr(self.parent, argname, None)72 setattr(self, argname, argument)73class TieredCLI(BaseCLI, metaclass=TieredCLIMeta):74 def __init__(self, *args, **kwargs):75 self._setup_parser()76 self._setup_subcommands()77 self._parse_args()78 def _setup_subcommands(self):79 self.subcommands = Subcommands()80 for argname, arg in self._meta.subcommands.items():81 command = arg(parent=self, argname=argname)82 self.subcommands.add(argname, command)83 def _setup_parser(self):84 self.parser = argparse.ArgumentParser()85 self.subparsers = self.parser.add_subparsers(86 help='Commands',87 dest='command'88 )89 def _parse_args(self):90 self.parser.parse_args(namespace=self)91 for subcommand in self.subcommands:92 subcommand._parse_args()93 async def call(self):94 command = getattr(self.subcommands, self.command)...
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